RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 TRAV8-7A0A075B6U6 113 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 A0A087WWC5 75 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 TRAV39A0A0B4J263 110 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 C7orf71A4D174 169 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 ISG15P05161 165 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 SPCS1Q9Y6A9 102 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 NOTCH2Q04721 2471 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 J3KRW8 73 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 C2orf68Q2NKX9 166 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 CBLN3Q6UW01 205 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 SOSTQ9BQB4 213 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 REG4Q9BYZ8 158 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 NPDC1Q9NQX5 325 aaPredicted RBP5.36□□□□□ -1.55
PTPN3-202ENST00000374541 PRR13Q9NZ81 148 aa5.36□□□□□ -1.55
PTPN3-202ENST00000374541 PPIAL4CA0A0B4J2A2 164 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 PATE4P0C8F1 98 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 PPIAL4GP0DN37 164 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 HTN1P15515 57 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF146Q15072 292 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 PIGYQ3MUY2 71 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 IL17RELQ6ZVW7 336 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 LRTM2Q8N967 370 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 PGLYRP4Q96LB8 373 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 SLC25A2Q9BXI2 301 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 CLDN16Q9Y5I7 305 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 MEX3AA1L020 520 aaKnown RBP5.35□□□□□ -1.55
PTPN3-202ENST00000374541 NPFFO15130 113 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 PTP4A3O75365 173 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 COX5BP10606 129 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 RND3P61587 244 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 PSG6Q00889 435 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 RUNX1Q01196 453 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 COL10A1Q03692 680 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 GCSAMLQ5JQS6 135 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 DNM1P46Q6ZS02 220 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 IGHV3OR15-7A0A075B7D8 119 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF815PA8K554 130 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 FOXS1O43638 330 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 GPX4P36969 197 aaPredicted RBP5.35□□□□□ -1.55
PTPN3-202ENST00000374541 PCSK4Q6UW60 755 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 OR1K1Q8NGR3 316 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 SRSF12Q8WXF0 261 aaKnown RBP5.35□□□□□ -1.55
PTPN3-202ENST00000374541 AQP3Q92482 292 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 RIPPLY3P57055 190 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 TMEM186Q96B77 213 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF729A6NN14 1252 aaPredicted RBP5.35□□□□□ -1.55
PTPN3-202ENST00000374541 SIGLEC5O15389 551 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 MPV17P39210 176 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 SUMO2P61956 95 aaKnown RBP5.35□□□□□ -1.55
PTPN3-202ENST00000374541 APCDD1LQ8NCL9 501 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 KCNS1Q96KK3 526 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 RHOVQ96L33 236 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 UCN2Q96RP3 112 aa5.35□□□□□ -1.55
PTPN3-202ENST00000374541 SDHCQ99643 169 aaPredicted RBP5.35□□□□□ -1.55
PTPN3-202ENST00000374541 P2RY4P51582 365 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 RND2P52198 227 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 SNRPD3P62318 126 aaKnown RBP5.34□□□□□ -1.55
PTPN3-202ENST00000374541 NHLRC3Q5JS37 347 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 CYP2G1PQ6ZSU1 146 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 SELENOHQ8IZQ5 122 aaKnown RBP5.34□□□□□ -1.55
PTPN3-202ENST00000374541 OR13C6PQ8NH95 151 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 WDYHV1Q96HA8 205 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 SPTBN1Q01082 2364 aaKnown RBP5.34□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF236Q9UL36 1845 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 SCN1AP35498 2009 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 TRBV20OR9-2A0A075B6H5 130 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 A0A0G2JNJ9 132 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 FAM181BA6NEQ2 426 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 H0YL77 283 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 RNASE1P07998 156 aaKnown RBP5.34□□□□□ -1.55
PTPN3-202ENST00000374541 TNFRSF9Q07011 255 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 C9orf106Q8NAJ2 232 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 PRDM13Q9H4Q3 707 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 AURKAIP1Q9NWT8 199 aaPredicted RBP5.34□□□□□ -1.55
PTPN3-202ENST00000374541 IDI2-AS1Q9NZ38 188 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 Q9UFV3 132 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 FAM208BQ5VWN6 2430 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 CKAP5Q14008 2032 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 PGLYRP1O75594 196 aaPredicted RBP5.34□□□□□ -1.55
PTPN3-202ENST00000374541 IL18BPO95998 194 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 GPX1P07203 203 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 LIMS1P48059 325 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 CD300CQ08708 224 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 FAM71F2Q6NXP2 309 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 C9orf40Q8IXQ3 194 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 CIARTQ8N365 385 aaPredicted RBP5.34□□□□□ -1.55
PTPN3-202ENST00000374541 OR2K2Q8NGT1 345 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 SSBP4Q9BWG4 385 aaPredicted RBP5.34□□□□□ -1.55
PTPN3-202ENST00000374541 IL36BQ9NZH7 164 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 IGHV3OR16-12A0A075B7B8 117 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 CD8AP01732 235 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 CT62P0C5K7 136 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 ASIPP42127 132 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 FOXL1Q12952 345 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF56Q15929 161 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 MIC13Q5XKP0 118 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 LIMS2Q7Z4I7 341 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 EEF1AKMT3Q96AZ1 226 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF703Q9H7S9 590 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms