RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 C1orf87Q8N0U7 546 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 FAM216AQ8WUB2 273 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 LRRC30A6NM36 301 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 ZNF737O75373 536 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 OR10J4P0C629 311 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 MORN2Q502X0 79 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 SMIM7Q9BQ49 75 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 SAA2-SAA4A0A096LPE2 208 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 PITX3O75364 302 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 GAPDHP04406 335 aaKnown RBP8.94□□□□□ -0.98
CXCL12-203ENST00000374429 SAA2P0DJI9 122 aaPredicted RBP8.94□□□□□ -0.98
CXCL12-203ENST00000374429 TAS2R30P59541 319 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 Q6ZSR3 168 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 FAM57AQ8TBR7 257 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 CORO2AQ92828 525 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 GNPNAT1Q96EK6 184 aaPredicted RBP8.94□□□□□ -0.98
CXCL12-203ENST00000374429 HIPK2Q9H2X6 1198 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 TMEM140Q9NV12 185 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 CFAP46Q8IYW2 2715 aa8.94□□□□□ -0.98
CXCL12-203ENST00000374429 MTORP42345 2549 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 TGIF2-C20orf24A0A0A6YYL0 155 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 MGST3O14880 152 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 GZMBP10144 247 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 COX5AP20674 150 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 ATP6V1FQ16864 119 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 CT45A1Q5HYN5 189 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 MOB1BQ7L9L4 216 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 ODF3L1Q8IXM7 274 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 CT45A3Q8NHU0 189 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 HIST1H2BLQ99880 126 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 GINS3Q9BRX5 216 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 CISD1Q9NZ45 108 aaKnown RBP8.93□□□□□ -0.98
CXCL12-203ENST00000374429 RNF115Q9Y4L5 304 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 GZMHP20718 246 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 CCKARP32238 428 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 PAX5Q02548 391 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 HES1Q14469 280 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 JOSD1Q15040 202 aaPredicted RBP8.93□□□□□ -0.98
CXCL12-203ENST00000374429 TBR1Q16650 682 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 TAF15Q92804 592 aaKnown RBP eCLIP8.93□□□□□ -0.98
CXCL12-203ENST00000374429 ALKBH7Q9BT30 221 aaPredicted RBP8.93□□□□□ -0.98
CXCL12-203ENST00000374429 HILPDAQ9Y5L2 63 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 DYSFO75923 2080 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 ZNF320A2RRD8 509 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 PROP1O75360 226 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 CGAP01215 116 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 IGKV1D-33P01593 117 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 IGKV1-33P01594 117 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 ERVFC1-1P60608 527 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 SLC35B1P78383 322 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 ZNF525Q8N782 197 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 OR4C5Q8NGB2 326 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 FRZBQ92765 325 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 ARV1Q9H2C2 271 aa8.93□□□□□ -0.98
CXCL12-203ENST00000374429 SORL1Q92673 2214 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 IGHV3OR16-8A0A075B7F1 116 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 IGHV3-35A0A0C4DH35 117 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 TRGC1P0CF51 173 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 ACSM6Q6P461 480 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 HSD17B10Q99714 261 aaKnown RBP8.92□□□□□ -0.98
CXCL12-203ENST00000374429 TUBA4BQ9H853 241 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 ZNF430Q9H8G1 570 aaPredicted RBP8.92□□□□□ -0.98
CXCL12-203ENST00000374429 SLC35D1Q9NTN3 355 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 ONECUT1Q9UBC0 465 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 LAMP3Q9UQV4 416 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.92□□□□□ -0.98
CXCL12-203ENST00000374429 MBD3L4A6NDZ8 208 aaPredicted RBP8.92□□□□□ -0.98
CXCL12-203ENST00000374429 MBD3L3A6NE82 208 aaPredicted RBP8.92□□□□□ -0.98
CXCL12-203ENST00000374429 MBD3L5A6NJ08 208 aaPredicted RBP8.92□□□□□ -0.98
CXCL12-203ENST00000374429 SRRM5B3KS81 715 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 K7N7A8 449 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 THBS3P49746 956 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 BRWD1-AS2P59051 145 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 SLC35E4Q6ICL7 350 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 RPP25LQ8N5L8 163 aaKnown RBP8.92□□□□□ -0.98
CXCL12-203ENST00000374429 LRTM2Q8N967 370 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 MBD3L2Q8NHZ7 208 aaPredicted RBP8.92□□□□□ -0.98
CXCL12-203ENST00000374429 C1QTNF9BB2RNN3 333 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 DVL1O14640 695 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 HEPN1Q6WQI6 88 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 RNF2Q99496 336 aa8.92□□□□□ -0.98
CXCL12-203ENST00000374429 ACANP16112 2415 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 OR7C2O60412 319 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 RAB7AP51149 207 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 ADIPOQQ15848 244 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 TNFRSF14Q92956 283 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 MALSU1Q96EH3 234 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 SEPSECSQ9HD40 501 aaKnown RBP8.91□□□□□ -0.98
CXCL12-203ENST00000374429 LYL1P12980 280 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 DUTP33316 252 aaKnown RBP8.91□□□□□ -0.98
CXCL12-203ENST00000374429 ARF6P62330 175 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 RPL19P84098 196 aaKnown RBP8.91□□□□□ -0.98
CXCL12-203ENST00000374429 CDSNQ15517 529 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 ZNF295-AS1Q8N0V1 137 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 NHLRC2Q8NBF2 726 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 HARBI1Q96MB7 349 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 DERL1Q9BUN8 251 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 MBNL3Q9NUK0 354 aaKnown RBP8.91□□□□□ -0.98
CXCL12-203ENST00000374429 M0QZ24 198 aa8.91□□□□□ -0.98
CXCL12-203ENST00000374429 SLC25A17O43808 307 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms