RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TRAV9-2A0A087WT02 112 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 CCL21O00585 134 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 RNFT1Q5M7Z0 435 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 SCGB3A1Q96QR1 104 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 FOXC2Q99958 501 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 RTN4RQ9BZR6 473 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 APOMO95445 188 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 RSPO4Q2I0M5 234 aaPredicted RBP12.03□□□□□ -0.48
LMX1B-202ENST00000373474 FLVCR1-AS1Q8TAF5 88 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 IGLV3-19P01714 112 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 UCP1P25874 307 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 ZNF56Q15929 161 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 ORAOV1Q8WV07 137 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 ST6GALNAC6Q969X2 333 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 SLC25A2Q9BXI2 301 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
LMX1B-202ENST00000373474 GAS1P54826 345 aa12.02□□□□□ -0.48
LMX1B-202ENST00000373474 FNDC4Q9H6D8 234 aaPredicted RBP12.02□□□□□ -0.48
LMX1B-202ENST00000373474 ATG2BQ96BY7 2078 aa12.02□□□□□ -0.48
LMX1B-202ENST00000373474 A0A1W2PRS3 328 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 GPR6P46095 362 aaPredicted RBP12.02□□□□□ -0.49
LMX1B-202ENST00000373474 NRN1Q9NPD7 142 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 RPRMQ9NS64 109 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 IL6RP08887 468 aaPredicted RBP12.02□□□□□ -0.49
LMX1B-202ENST00000373474 RFPL3SP0C7P2 107 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 FTH1P19P0C7X4 201 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 FAM106CPP0CH98 169 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 SHISA5Q8N114 240 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 TMEM186Q96B77 213 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 SSBP3Q9BWW4 388 aaPredicted RBP12.02□□□□□ -0.49
LMX1B-202ENST00000373474 ZNF703Q9H7S9 590 aaPredicted RBP12.02□□□□□ -0.49
LMX1B-202ENST00000373474 MPZP25189 248 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 TGIF1Q15583 401 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 ACP7Q6ZNF0 438 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 RAX2Q96IS3 184 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 RNF126Q9BV68 326 aa12.02□□□□□ -0.49
LMX1B-202ENST00000373474 ZIC3O60481 467 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 CLDND2Q8NHS1 167 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 PRR7Q8TB68 274 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 TIMP4Q99727 224 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 FBLN5Q9UBX5 448 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 A0A1B0GUT8 65 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 A8MWV9 139 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 GPX1P07203 203 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 GAGE2EQ4V326 116 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 GFI1Q99684 422 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 GAGE2DQ9UEU5 116 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 OTOFQ9HC10 1997 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 LY6G6FQ5SQ64 297 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 PCSK4Q6UW60 755 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 GP6Q9HCN6 339 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 GOLT1AQ6ZVE7 132 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 FMC1Q96HJ9 113 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 TMEM106BQ9NUM4 274 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 FOXA3P55318 350 aaPredicted RBP12.01□□□□□ -0.49
LMX1B-202ENST00000373474 ATRAIDQ6UW56 229 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 MRPL52Q86TS9 123 aaKnown RBP12.01□□□□□ -0.49
LMX1B-202ENST00000373474 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 YAE1D1Q9NRH1 226 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 WDR90Q96KV7 1748 aa12.01□□□□□ -0.49
LMX1B-202ENST00000373474 KIAA0100Q14667 2235 aaKnown RBP12□□□□□ -0.49
LMX1B-202ENST00000373474 CCDC88CQ9P219 2028 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 RPP21Q9H633 154 aaKnown RBP12□□□□□ -0.49
LMX1B-202ENST00000373474 CKAP5Q14008 2032 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 F8VVB4 439 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 F8VWA3 439 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 SNAI2O43623 268 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 C18orf15Q96N68 181 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 CCL1P22362 96 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 TFF3Q07654 80 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 STPG1Q5TH74 334 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 Q6ZT83 130 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 OR9G1Q8NH87 305 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 ANK1P16157 1881 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 PRR32B1ATL7 298 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 HOXA3O43365 443 aaPredicted RBP12□□□□□ -0.49
LMX1B-202ENST00000373474 RPL39P5Q59GN2 51 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 VWCEQ96DN2 955 aa12□□□□□ -0.49
LMX1B-202ENST00000373474 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-202ENST00000373474 TRBV7-9A0A0J9YWB2 115 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 REG1AP05451 166 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 C12orf77C9JDV5 145 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 HSD52Q0P140 79 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 A0A087WV48 116 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 SERF1AO75920 110 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 OR10J3Q5JRS4 329 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 IMMP2LQ96T52 175 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 NHP2Q9NX24 153 aaKnown RBP11.99□□□□□ -0.49
LMX1B-202ENST00000373474 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-202ENST00000373474 LYZL4Q96KX0 146 aa11.99□□□□□ -0.49
LMX1B-202ENST00000373474 PAX2Q02962 417 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 GAGE13Q4V321 117 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 ORMDL3Q8N138 153 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 SIGLEC12Q96PQ1 595 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 CHODLQ9H9P2 273 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 LPAR2Q9HBW0 351 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 MRPS18CQ9Y3D5 142 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms