RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 OPN1MWP04001 364 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 OPN1MW2P0DN77 364 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 OPN1MW3P0DN78 364 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 RAB13P51153 203 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 PNRC1Q12796 327 aaPredicted RBP10.88□□□□□ -0.67
CSTF2-201ENST00000372972 DIAPH2-AS1Q14236 149 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 TEPPQ6URK8 271 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 ZNF841Q6ZN19 808 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 ITLN2Q8WWU7 325 aaPredicted RBP10.88□□□□□ -0.67
CSTF2-201ENST00000372972 RAB1CQ92928 201 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 NEIL1Q96FI4 390 aaPredicted RBP10.88□□□□□ -0.67
CSTF2-201ENST00000372972 C1orf159Q96HA4 380 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 KCNIP2Q9NS61 270 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 PXMP4Q9Y6I8 212 aa10.88□□□□□ -0.67
CSTF2-201ENST00000372972 YIF1AO95070 293 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 USF1P22415 310 aaPredicted RBP10.87□□□□□ -0.67
CSTF2-201ENST00000372972 IL3RAP26951 378 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 MC5RP33032 325 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 MAS1LP35410 378 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 RPL8P62917 257 aaKnown RBP10.87□□□□□ -0.67
CSTF2-201ENST00000372972 RAB31Q13636 194 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 TMEM249Q2WGJ8 235 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 GCSAMLQ5JQS6 135 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 TGIF2LXQ8IUE1 241 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 OR4A5Q8NH83 315 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 VSTM2AQ8TAG5 236 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 COMMD5Q9GZQ3 224 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 RAB1BQ9H0U4 201 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 WASHC3Q9Y3C0 194 aa10.87□□□□□ -0.67
CSTF2-201ENST00000372972 ZNF727A8MUV8 499 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 TMEM250H0YL14 139 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 DEFA4P12838 97 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 RAB5AP20339 215 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 RAB5BP61020 215 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 C2orf83Q53S99 150 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 MIC13Q5XKP0 118 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 IQCF2Q8IXL9 164 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 TMEM167AQ8TBQ9 72 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 TNFRSF14Q92956 283 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 PATZ1Q9HBE1 687 aaKnown RBP10.86□□□□□ -0.67
CSTF2-201ENST00000372972 SDF2L1Q9HCN8 221 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 SIRT7Q9NRC8 400 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 NDUFA4L2Q9NRX3 87 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 CXorf65A6NEN9 183 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 C1orf196B1AJZ1 125 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 WDR25Q64LD2 544 aaPredicted RBP10.86□□□□□ -0.67
CSTF2-201ENST00000372972 OR1L8Q8NGR8 309 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
CSTF2-201ENST00000372972 IGSF10Q6WRI0 2623 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 AGAP20933 346 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 PRRX1P54821 245 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 BSXQ3C1V8 233 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 GATAD1Q8WUU5 269 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 SAV1Q9H4B6 383 aaPredicted RBP10.85□□□□□ -0.67
CSTF2-201ENST00000372972 CBLN4Q9NTU7 201 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 INS-IGF2F8WCM5 200 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 PAGE4O60829 102 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 RPL29P47914 159 aaKnown RBP10.85□□□□□ -0.67
CSTF2-201ENST00000372972 B2MP61769 119 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 ERHP84090 104 aaKnown RBP10.85□□□□□ -0.67
CSTF2-201ENST00000372972 HABP2Q14520 560 aaPredicted RBP10.85□□□□□ -0.67
CSTF2-201ENST00000372972 ZFP82Q8N141 532 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 OR10W1Q8NGF6 305 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 OR4F5Q8NH21 305 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 SSMEM1Q8WWF3 244 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 OR4F4Q96R69 305 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 BIN3Q9NQY0 253 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 MIOXQ9UGB7 285 aa10.85□□□□□ -0.67
CSTF2-201ENST00000372972 USP24Q9UPU5 2620 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 IGHV2-26A0A0B4J1V2 119 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 PPIAL4CA0A0B4J2A2 164 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 hCG_1809904A0A1W2PP81 198 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 A0A1W2PR64 198 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 A0A1W2PRV1 198 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 TSPAN9O75954 239 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 IGLV2-23P01705 113 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 RBP4P02753 201 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 PPIAL4GP0DN37 164 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 RNASE2P10153 161 aaKnown RBP10.84□□□□□ -0.67
CSTF2-201ENST00000372972 LGALS7P47929 136 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 TMEM144Q7Z5S9 345 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 MALSU1Q96EH3 234 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 SMIM7Q9BQ49 75 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 NAT8Q9UHE5 227 aa10.84□□□□□ -0.67
CSTF2-201ENST00000372972 A0A1W2PN81 502 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 IGLV1-47P01700 117 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 STAG3L2P0CL84 134 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 STAG3L3P0CL85 134 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 CHRNA7P36544 502 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 VMA21Q3ZAQ7 101 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 STPG3Q8N7X2 389 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 OR8B3Q8NGG8 313 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 C8orf46Q8TAG6 207 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 C2CD4CQ8TF44 421 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 OR8B2Q96RD0 313 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 TMEM242Q9NWH2 141 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 SPTBN1Q01082 2364 aaKnown RBP10.83□□□□□ -0.68
CSTF2-201ENST00000372972 ABCA4P78363 2273 aa10.83□□□□□ -0.68
CSTF2-201ENST00000372972 C11orf94C9JXX5 98 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms