RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 RAB31Q13636 194 aa19.23■□□□□ 0.67
SNX21-204ENST00000372542 C15orf54Q8N8G6 183 aa19.23■□□□□ 0.67
SNX21-204ENST00000372542 CHODLQ9H9P2 273 aa19.23■□□□□ 0.67
SNX21-204ENST00000372542 MANBALQ9NQG1 85 aa19.23■□□□□ 0.67
SNX21-204ENST00000372542 NDUFA4L2Q9NRX3 87 aa19.23■□□□□ 0.67
SNX21-204ENST00000372542 H3BQ15 152 aa19.22■□□□□ 0.67
SNX21-204ENST00000372542 IGLV2-23P01705 113 aa19.22■□□□□ 0.67
SNX21-204ENST00000372542 FBP1P09467 338 aa19.22■□□□□ 0.67
SNX21-204ENST00000372542 CEBPGP53567 150 aa19.22■□□□□ 0.67
SNX21-204ENST00000372542 TMEM249Q2WGJ8 235 aa19.22■□□□□ 0.67
SNX21-204ENST00000372542 ARSJQ5FYB0 599 aaPredicted RBP19.22■□□□□ 0.67
SNX21-204ENST00000372542 TEPPQ6URK8 271 aa19.22■□□□□ 0.67
SNX21-204ENST00000372542 NIPSNAP3BQ9BS92 247 aa19.22■□□□□ 0.67
SNX21-204ENST00000372542 ERHP84090 104 aaKnown RBP19.21■□□□□ 0.67
SNX21-204ENST00000372542 SLC35E3Q7Z769 313 aa19.21■□□□□ 0.67
SNX21-204ENST00000372542 C20orf24Q9BUV8 137 aa19.21■□□□□ 0.67
SNX21-204ENST00000372542 OPN1MWP04001 364 aa19.21■□□□□ 0.67
SNX21-204ENST00000372542 OPN1MW2P0DN77 364 aa19.21■□□□□ 0.67
SNX21-204ENST00000372542 OPN1MW3P0DN78 364 aa19.21■□□□□ 0.67
SNX21-204ENST00000372542 PSMB3P49720 205 aa19.21■□□□□ 0.67
SNX21-204ENST00000372542 TVP23CQ96ET8 276 aa19.21■□□□□ 0.67
SNX21-204ENST00000372542 PXMP4Q9Y6I8 212 aa19.21■□□□□ 0.67
SNX21-204ENST00000372542 COL6A6A6NMZ7 2263 aa19.21■□□□□ 0.66
SNX21-204ENST00000372542 GNLYP22749 145 aa19.2■□□□□ 0.66
SNX21-204ENST00000372542 PATZ1Q9HBE1 687 aaKnown RBP19.2■□□□□ 0.66
SNX21-204ENST00000372542 A0A1W2PPV4 95 aa19.19■□□□□ 0.66
SNX21-204ENST00000372542 BUB1B-PAK6H3BSN5 160 aa19.19■□□□□ 0.66
SNX21-204ENST00000372542 RNASE2P10153 161 aaKnown RBP19.19■□□□□ 0.66
SNX21-204ENST00000372542 FAM90A2PQ658T7 463 aa19.19■□□□□ 0.66
SNX21-204ENST00000372542 NCOR2Q9Y618 2525 aa19.19■□□□□ 0.66
SNX21-204ENST00000372542 LY6HO94772 140 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 YIF1AO95070 293 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 AKR1C3P42330 323 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 UQCRFS1P47985 274 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 MEF2BQ02080 365 aaPredicted RBP19.18■□□□□ 0.66
SNX21-204ENST00000372542 TEX45Q8NA69 505 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 MALRD1Q5VYJ5 2156 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 ABCA4P78363 2273 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 COLCA2A8K830 154 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 RPL29P47914 159 aaKnown RBP19.18■□□□□ 0.66
SNX21-204ENST00000372542 C1orf159Q96HA4 380 aa19.18■□□□□ 0.66
SNX21-204ENST00000372542 HMGB3O15347 200 aaKnown RBP19.17■□□□□ 0.66
SNX21-204ENST00000372542 MIC13Q5XKP0 118 aa19.17■□□□□ 0.66
SNX21-204ENST00000372542 TMEM144Q7Z5S9 345 aa19.17■□□□□ 0.66
SNX21-204ENST00000372542 ZNF430Q9H8G1 570 aaPredicted RBP19.17■□□□□ 0.66
SNX21-204ENST00000372542 ONECUT1Q9UBC0 465 aa19.17■□□□□ 0.66
SNX21-204ENST00000372542 INSIG2Q9Y5U4 225 aa19.17■□□□□ 0.66
SNX21-204ENST00000372542 A0A087WWC5 75 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 IGHV1-3A0A0C4DH29 117 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 C22orf46C9J442 243 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 ENSAO43768 121 aaKnown RBP19.16■□□□□ 0.66
SNX21-204ENST00000372542 B2MP61769 119 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 PNRC1Q12796 327 aaPredicted RBP19.16■□□□□ 0.66
SNX21-204ENST00000372542 NBASA2RRP1 2371 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 TMEM250H0YL14 139 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 M0R1W7 72 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 EIF3GO75821 320 aaKnown RBP eCLIP19.16■□□□□ 0.66
SNX21-204ENST00000372542 MRPL41Q8IXM3 137 aaKnown RBP19.16■□□□□ 0.66
SNX21-204ENST00000372542 OR4P4Q8NGL7 312 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 CACNG8Q8WXS5 425 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 SSBP3Q9BWW4 388 aaPredicted RBP19.16■□□□□ 0.66
SNX21-204ENST00000372542 TMPRSS5Q9H3S3 457 aa19.16■□□□□ 0.66
SNX21-204ENST00000372542 TNCP24821 2201 aa19.15■□□□□ 0.66
SNX21-204ENST00000372542 B4DEV8 164 aa19.15■□□□□ 0.66
SNX21-204ENST00000372542 SLC25A17O43808 307 aa19.15■□□□□ 0.66
SNX21-204ENST00000372542 COX7A1P24310 79 aa19.15■□□□□ 0.66
SNX21-204ENST00000372542 GPX4P36969 197 aaPredicted RBP19.15■□□□□ 0.66
SNX21-204ENST00000372542 SUB1P53999 127 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX21-204ENST00000372542 CD81P60033 236 aa19.15■□□□□ 0.66
SNX21-204ENST00000372542 FLI1Q01543 452 aaPredicted RBP19.15■□□□□ 0.66
SNX21-204ENST00000372542 OR10W1Q8NGF6 305 aa19.15■□□□□ 0.66
SNX21-204ENST00000372542 RPEQ96AT9 228 aa19.15■□□□□ 0.66
SNX21-204ENST00000372542 LOC105371242A0A075B767 164 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 CD69Q07108 199 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 GCSAMLQ5JQS6 135 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 MOB3BQ86TA1 216 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 MMD2Q8IY49 270 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 STPG3Q8N7X2 389 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 A0A1W2PPR1 153 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 MT-ND4LP03901 98 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 FOLR2P14207 255 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 IQCF2Q8IXL9 164 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 PNKDQ8N490 385 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 SSMEM1Q8WWF3 244 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 RNF5Q99942 180 aa19.14■□□□□ 0.65
SNX21-204ENST00000372542 PIEZO1Q92508 2521 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 HIVEP3Q5T1R4 2406 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 CHD8Q9HCK8 2581 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 A6NNC1 897 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 LY6LH3BQJ8 138 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 MAS1LP35410 378 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 GPR6P46095 362 aaPredicted RBP19.13■□□□□ 0.65
SNX21-204ENST00000372542 PRR20EP86478 221 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 PRR20CP86479 221 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 PRR20DP86480 221 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 PRR20BP86481 221 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 PRR20AP86496 221 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 RNASEH2CQ8TDP1 164 aaKnown RBP19.13■□□□□ 0.65
SNX21-204ENST00000372542 MLXQ9UH92 298 aa19.13■□□□□ 0.65
SNX21-204ENST00000372542 IGHV3-72A0A0B4J1Y9 119 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms