RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LINC01559Q495D7 138 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 GMLQ99445 158 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 GVINP1Q7Z2Y8 2422 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 SLC25A38Q96DW6 304 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 C1orf174Q8IYL3 243 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 ATP6V0BQ99437 205 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 TOMM7Q9P0U1 55 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 TRBV5-3A0A0A0MS03 114 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 SNRPD3P62318 126 aaKnown RBP13.07□□□□□ -0.32
COL5A1-201ENST00000371817 WNK1Q9H4A3 2382 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 ARID2Q68CP9 1835 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 C2orf82Q6UX34 121 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 GP6Q9HCN6 339 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 NXT2Q9NPJ8 142 aaKnown RBP13.07□□□□□ -0.32
COL5A1-201ENST00000371817 TMEM242Q9NWH2 141 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 TRAV24A0A0B4J272 114 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 SPRED2Q7Z698 418 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 IGHV3OR16-12A0A075B7B8 117 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 A0A1W2PPE3 182 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 LOXL4Q96JB6 756 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 SERGEFQ9UGK8 458 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 LOC105371242A0A075B767 164 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 PPIAL4CA0A0B4J2A2 164 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 PPIAL4GP0DN37 164 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 ZP1P60852 638 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 GFI1BQ5VTD9 330 aa13.07□□□□□ -0.32
COL5A1-201ENST00000371817 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A10PA6NDY2 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A18PA6NE21 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A16PA6NEW6 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A20PA6NIJ5 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A8PA6NJQ4 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A7PA6NKC0 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A22PA8MWA6 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A12PA8MX19 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A5PA8MXJ8 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A23PA8MXZ1 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A15PP0C7V4 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A13PP0C7W8 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A14PP0C7W9 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM90A24PP0C7X0 464 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 GZMBP10144 247 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 UNQ5815/PRO19632Q6UWF5 114 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 RFLNBQ8N5W9 214 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 CRPP02741 224 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 LINC01555Q8NAE3 123 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 NTN1O95631 604 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 SRSF1Q07955 248 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL5A1-201ENST00000371817 NBEAP1P0C6P0 100 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM117AQ9C073 453 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 RNASE7Q9H1E1 156 aaKnown RBP13.06□□□□□ -0.32
COL5A1-201ENST00000371817 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 FAM106CPP0CH98 169 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 SPINT1O43278 529 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 GPHA2Q96T91 129 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 PLXNA1Q9UIW2 1896 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 IFITM1P13164 125 aa13.06□□□□□ -0.32
COL5A1-201ENST00000371817 TMEM238C9JI98 176 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 ICAM4Q14773 271 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 FER1L6-AS1Q8NA97 138 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 SPANXCQ9NY87 97 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 IFI27P40305 119 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-201ENST00000371817 PGFP49763 221 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 SOX8P57073 446 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 MRPL20Q9BYC9 149 aaKnown RBP13.05□□□□□ -0.32
COL5A1-201ENST00000371817 CEACAM1P13688 526 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 LRRC61Q9BV99 259 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 GCSAMQ8N6F7 178 aa13.05□□□□□ -0.32
COL5A1-201ENST00000371817 ZNF818PQ6ZRF7 136 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-201ENST00000371817 RAX2Q96IS3 184 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 CHTOPQ9Y3Y2 248 aaKnown RBP13.04□□□□□ -0.32
COL5A1-201ENST00000371817 C1orf122Q6ZSJ8 110 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 PLA2G3Q9NZ20 509 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 HS3ST3B1Q9Y662 390 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-201ENST00000371817 OR2H2O95918 312 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 OVOL2Q9BRP0 275 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 CCL7P80098 99 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 KIR3DS1Q14943 382 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 JMJD8Q96S16 334 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
COL5A1-201ENST00000371817 A0A087X0K7 114 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 hCG_38984A0A1B0GV85 526 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 REG1AP05451 166 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 C1orf100Q5SVJ3 147 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 Q6ZNB5 142 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 PCDH15Q96QU1 1955 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 GREB1LQ9C091 1923 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-201ENST00000371817 ZIC3O60481 467 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 CD3EP07766 207 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 GDF15Q99988 308 aa13.04□□□□□ -0.32
COL5A1-201ENST00000371817 ABHD12Q8N2K0 398 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 TMEM229AB2RXF0 380 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 TCF19Q9Y242 345 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms