RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ASIPP42127 132 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 SMIM8Q96KF7 97 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 H3BUT2 72 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 NPPCP23582 126 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 LY6EQ16553 131 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 PRSS53Q2L4Q9 553 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 ZNF818PQ6ZRF7 136 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 TMEM52Q8NDY8 209 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 IGKV3D-20A0A0C4DH25 116 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 TRBV5-5A0A0J9YX44 114 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 ERVH48-1M5A8F1 160 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 HSPE1P61604 102 aaKnown RBP10.65□□□□□ -0.7
HCFC1-202ENST00000369984 WDR82Q6UXN9 313 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 FAM214BQ7L5A3 538 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 APCDD1LQ8NCL9 501 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 SHANK1Q9Y566 2161 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 EGR1P18146 543 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 GZMMP51124 257 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 ABHD12Q8N2K0 398 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 CLDND2Q8NHS1 167 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 DLL3Q9NYJ7 618 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 A0A0J9YW62 118 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 TOMM7Q9P0U1 55 aa10.65□□□□□ -0.7
HCFC1-202ENST00000369984 C9JCJ5 164 aa10.65□□□□□ -0.71
HCFC1-202ENST00000369984 PTGDSP41222 190 aa10.65□□□□□ -0.71
HCFC1-202ENST00000369984 DUSP15Q9H1R2 295 aaPredicted RBP10.64□□□□□ -0.71
HCFC1-202ENST00000369984 IFNL4K9M1U5 179 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 PCSK4Q6UW60 755 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 NABP2Q9BQ15 211 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 PPIAL4CA0A0B4J2A2 164 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 PRR33A8MZF0 331 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 PPIAL4GP0DN37 164 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 COL24A1Q17RW2 1714 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 M0R381 172 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 NDUFA2O43678 99 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A10PA6NDY2 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A18PA6NE21 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A16PA6NEW6 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A20PA6NIJ5 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A8PA6NJQ4 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A7PA6NKC0 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A22PA8MWA6 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A12PA8MX19 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A5PA8MXJ8 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A23PA8MXZ1 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 ATXN7O15265 892 aaPredicted RBP10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A15PP0C7V4 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A13PP0C7W8 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A14PP0C7W9 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 FAM90A24PP0C7X0 464 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 PEX7O00628 323 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 C1QAP02745 245 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 GAGE2BQ13066 116 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 TGIF1Q15583 401 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 GAGE2EQ4V326 116 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 SDHCQ99643 169 aaPredicted RBP10.64□□□□□ -0.71
HCFC1-202ENST00000369984 GAGE2DQ9UEU5 116 aa10.64□□□□□ -0.71
HCFC1-202ENST00000369984 GGTLC3B5MD39 225 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 CELA2AP08217 269 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 DTX2Q86UW9 622 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 MGST2Q99735 147 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 TRAV8-1A0A0A6YYK1 113 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 AHRRA9YTQ3 701 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 LOC105371242A0A075B767 164 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 MOSP00540 346 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 HOXA5P20719 270 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 GCHFRP30047 84 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 CENPVQ7Z7K6 275 aaPredicted RBP10.63□□□□□ -0.71
HCFC1-202ENST00000369984 CCL19Q99731 98 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 CACNA1GO43497 2377 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 FOXS1O43638 330 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 SAXO1Q8IYX7 474 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 TTC9CQ8N5M4 171 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 SLC25A15Q9Y619 301 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 LHFPL6Q9Y693 200 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 APOHP02749 345 aaPredicted RBP10.63□□□□□ -0.71
HCFC1-202ENST00000369984 ACSF3Q4G176 576 aaPredicted RBP10.63□□□□□ -0.71
HCFC1-202ENST00000369984 FHL5Q5TD97 284 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 PCNX1Q96RV3 2341 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 ATP5LO75964 103 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 C1QCP02747 245 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 ZNF124Q15973 351 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 MS4A6AQ9H2W1 248 aa10.63□□□□□ -0.71
HCFC1-202ENST00000369984 IGHV3-66A0A0C4DH42 116 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 GCM2O75603 506 aaPredicted RBP10.62□□□□□ -0.71
HCFC1-202ENST00000369984 GPX4P36969 197 aaPredicted RBP10.62□□□□□ -0.71
HCFC1-202ENST00000369984 HIST1H2BAQ96A08 127 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 MRPL20Q9BYC9 149 aaKnown RBP10.62□□□□□ -0.71
HCFC1-202ENST00000369984 DENND4AQ7Z401 1863 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 A0A1B0GW15 77 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 IL9P15248 144 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 TBR1Q16650 682 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 FMC1Q96HJ9 113 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 KCNK17Q96T54 332 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 CLEC7AQ9BXN2 247 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 SYNGR3O43761 229 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 TMEM187Q14656 261 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms