RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 IGLC3P0DOY3 106 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 MGST1P10620 155 aaKnown RBP10.18□□□□□ -0.78
PHGDH-201ENST00000369407 NRN1LQ496H8 165 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 UTF1Q5T230 341 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 PRR27Q6MZM9 219 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 MOB3BQ86TA1 216 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 OR4B1Q8NGF8 309 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 FAM216AQ8WUB2 273 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 POLDIP2Q9Y2S7 368 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 OR10J4P0C629 311 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 ESDP10768 282 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 CTRLP40313 264 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 OPRK1P41145 380 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 ZNF146Q15072 292 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 STPG3Q8N7X2 389 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 SLC25A40Q8TBP6 338 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 RAB1CQ92928 201 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 LEAP2Q969E1 77 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 SSBP3Q9BWW4 388 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-201ENST00000369407 BET1LQ9NYM9 111 aa10.18□□□□□ -0.78
PHGDH-201ENST00000369407 HCFC1P51610 2035 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 SVILO95425 2214 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 MRPL49Q13405 166 aaKnown RBP10.17□□□□□ -0.78
PHGDH-201ENST00000369407 PSG5Q15238 335 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 TAAR6Q96RI8 345 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 GSX1Q9H4S2 264 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-201ENST00000369407 COX11Q9Y6N1 276 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 M0R1X1 148 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 MPV17P39210 176 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 GNG4P50150 75 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 Q0VG73 95 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 OR1C1Q15619 314 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 LYSMD4Q5XG99 296 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 ORAOV1Q8WV07 137 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 CORO2AQ92828 525 aa10.17□□□□□ -0.78
PHGDH-201ENST00000369407 SMG1Q96Q15 3661 aaKnown RBP10.17□□□□□ -0.78
PHGDH-201ENST00000369407 DPRXA6NFQ7 191 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 OOEPA6NGQ2 149 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 SAP30O75446 220 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 HSD17B10Q99714 261 aaKnown RBP10.16□□□□□ -0.78
PHGDH-201ENST00000369407 UQCR10Q9UDW1 63 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 BOKQ9UMX3 212 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-201ENST00000369407 SLC45A2Q9UMX9 530 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 SPENQ96T58 3664 aaKnown RBP10.16□□□□□ -0.78
PHGDH-201ENST00000369407 HELTA6NFD8 242 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 IGFBP2P18065 325 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 GPR12P47775 334 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 NIT1Q86X76 327 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 ZBTB34Q8NCN2 500 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 GMPPAQ96IJ6 420 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-201ENST00000369407 KCNS1Q96KK3 526 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 SFXN3Q9BWM7 321 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 TNRC6BQ9UPQ9 1833 aaKnown RBP10.16□□□□□ -0.78
PHGDH-201ENST00000369407 KMT2EQ8IZD2 1858 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 TET2Q6N021 2002 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-201ENST00000369407 BMPR1BO00238 502 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 GFRA3O60609 400 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 CXCL12P48061 93 aa10.16□□□□□ -0.78
PHGDH-201ENST00000369407 TNRC18O15417 2968 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-201ENST00000369407 PLGLB1Q02325 96 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 FAM168AQ92567 244 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 LINC00479Q96M42 142 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 NCOR1P1Q9H4R4 102 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 GP6Q9HCN6 339 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 GNG12Q9UBI6 72 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 SH3BGRL2Q9UJC5 107 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 ICE1Q9Y2F5 2266 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 K7ESF4 209 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 GNG7O60262 68 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 TNFSF4P23510 183 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 RELBQ01201 579 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 Q56UQ5 140 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 MRPL52Q86TS9 123 aaKnown RBP10.15□□□□□ -0.78
PHGDH-201ENST00000369407 Q8IYB0 196 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 SPEM1Q8N4L4 309 aa10.15□□□□□ -0.78
PHGDH-201ENST00000369407 MRPS17Q9Y2R5 130 aaKnown RBP10.15□□□□□ -0.78
PHGDH-201ENST00000369407 CHTOPQ9Y3Y2 248 aaKnown RBP10.15□□□□□ -0.78
PHGDH-201ENST00000369407 ZNF324O75467 553 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-201ENST00000369407 LYZL6O75951 148 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 CA2P00918 260 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 DUTP33316 252 aaKnown RBP10.14□□□□□ -0.79
PHGDH-201ENST00000369407 VDAC2P45880 294 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-201ENST00000369407 GPR6P46095 362 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-201ENST00000369407 TSKUQ8WUA8 353 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 CDX2Q99626 313 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-201ENST00000369407 CLEC7AQ9BXN2 247 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 GNB1LQ9BYB4 327 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 TTTY12Q9BZ98 90 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 DEFB127Q9H1M4 99 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 CDC42EP3Q9UKI2 254 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 TNCP24821 2201 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 K7EP13 123 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 OR7C2O60412 319 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 SLAQ13239 276 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 TBC1D28Q2M2D7 210 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 TMEM251Q8N6I4 163 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 SVIPQ8NHG7 77 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 CT55Q8WUE5 264 aa10.14□□□□□ -0.79
PHGDH-201ENST00000369407 ZNF318Q5VUA4 2279 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms