RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 RBMS3Q6XE24 437 aaKnown RBP9.8□□□□□ -0.84
TUBE1-202ENST00000368662 ACOT7LQ6ZUV0 252 aa9.8□□□□□ -0.84
TUBE1-202ENST00000368662 HSD17B13Q7Z5P4 300 aaPredicted RBP9.8□□□□□ -0.84
TUBE1-202ENST00000368662 OR2C3Q8N628 320 aa9.8□□□□□ -0.84
TUBE1-202ENST00000368662 SMR3AQ99954 134 aa9.8□□□□□ -0.84
TUBE1-202ENST00000368662 HINT2Q9BX68 163 aa9.8□□□□□ -0.84
TUBE1-202ENST00000368662 MFFQ9GZY8 342 aa9.8□□□□□ -0.84
TUBE1-202ENST00000368662 SLC25A31Q9H0C2 315 aa9.8□□□□□ -0.84
TUBE1-202ENST00000368662 C11orf1Q9H5F2 150 aa9.8□□□□□ -0.84
TUBE1-202ENST00000368662 HEYLQ9NQ87 328 aaPredicted RBP9.8□□□□□ -0.84
TUBE1-202ENST00000368662 PSENENQ9NZ42 101 aa9.8□□□□□ -0.84
TUBE1-202ENST00000368662 HIVEP1P15822 2718 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 IAPPP10997 89 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 CAV2P51636 162 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 OR2F1Q13607 317 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 LY6EQ16553 131 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 TUSC1Q2TAM9 212 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 TMEM219Q86XT9 240 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 TMEM86BQ8N661 226 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 C5orf56Q8N8D9 126 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 GRPEL2Q8TAA5 225 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 ZNF48Q96MX3 618 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-202ENST00000368662 AQP10Q96PS8 301 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 SRSF8Q9BRL6 282 aaKnown RBP9.79□□□□□ -0.84
TUBE1-202ENST00000368662 U3KQ87 197 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 FCN1O00602 326 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 SCAF4O95104 1147 aaKnown RBP9.79□□□□□ -0.84
TUBE1-202ENST00000368662 IGHV4-59P01825 116 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 OPN1MWP04001 364 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 OPN1MW2P0DN77 364 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 OPN1MW3P0DN78 364 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 C4BPBP20851 252 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 RPL12P30050 165 aaKnown RBP9.79□□□□□ -0.84
TUBE1-202ENST00000368662 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-202ENST00000368662 SPINK9Q5DT21 86 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 SRSF12Q8WXF0 261 aaKnown RBP9.79□□□□□ -0.84
TUBE1-202ENST00000368662 VPREB3Q9UKI3 123 aa9.79□□□□□ -0.84
TUBE1-202ENST00000368662 A0A0D9SG52 128 aa9.78□□□□□ -0.84
TUBE1-202ENST00000368662 TMEM50AO95807 157 aa9.78□□□□□ -0.84
TUBE1-202ENST00000368662 MYOD1P15172 320 aa9.78□□□□□ -0.84
TUBE1-202ENST00000368662 VDAC2P45880 294 aaPredicted RBP9.78□□□□□ -0.84
TUBE1-202ENST00000368662 NKX2-5P52952 324 aaPredicted RBP9.78□□□□□ -0.84
TUBE1-202ENST00000368662 PAX9P55771 341 aa9.78□□□□□ -0.84
TUBE1-202ENST00000368662 ERHP84090 104 aaKnown RBP9.78□□□□□ -0.84
TUBE1-202ENST00000368662 BAXQ07812 192 aa9.78□□□□□ -0.84
TUBE1-202ENST00000368662 FXYD3Q14802 87 aa9.78□□□□□ -0.84
TUBE1-202ENST00000368662 ZC4H2Q9NQZ6 224 aa9.78□□□□□ -0.84
TUBE1-202ENST00000368662 STRAPQ9Y3F4 350 aaKnown RBP9.78□□□□□ -0.84
TUBE1-202ENST00000368662 MTORP42345 2549 aa9.78□□□□□ -0.84
TUBE1-202ENST00000368662 RNF222A6NCQ9 220 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 HKR1P10072 659 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 SRD5A1P18405 259 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 HTR2BP41595 481 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 CX3CL1P78423 397 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 C10orf55Q5SWW7 151 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 STX12Q86Y82 276 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 C9orf62Q8N4C0 152 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 SIGLECL1Q8N7X8 197 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 ARPC1AQ92747 370 aa9.77□□□□□ -0.84
TUBE1-202ENST00000368662 HOXA3O43365 443 aaPredicted RBP9.77□□□□□ -0.85
TUBE1-202ENST00000368662 IFNA10P01566 189 aa9.77□□□□□ -0.85
TUBE1-202ENST00000368662 SNCAP37840 140 aa9.77□□□□□ -0.85
TUBE1-202ENST00000368662 SSBP2P81877 361 aaPredicted RBP9.77□□□□□ -0.85
TUBE1-202ENST00000368662 SPANXN5Q5MJ07 72 aa9.77□□□□□ -0.85
TUBE1-202ENST00000368662 TMEM252Q8N6L7 170 aa9.77□□□□□ -0.85
TUBE1-202ENST00000368662 IGHV7-81A0A0B4J1V7 117 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 CGB1A6NKQ9 187 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 E7EUB6 86 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 H3BP45 60 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 SULT1A1P50225 295 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 AP2S1P53680 142 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-202ENST00000368662 RAB11AP62491 216 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 LGALSLQ3ZCW2 172 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-202ENST00000368662 TMEM14EPQ6UXP3 125 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 KCNRGQ8N5I3 272 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 SLC24A4Q8NFF2 622 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 HSPB11Q9Y547 144 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 TET2Q6N021 2002 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-202ENST00000368662 FAM24AA6NFZ4 105 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 MSGN1A6NI15 193 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 TEX22C9J3V5 150 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 KCNAB3O43448 404 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 CXCL2P19875 107 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 S100A11P31949 105 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
TUBE1-202ENST00000368662 EWSR1Q01844 656 aaKnown RBP eCLIP9.76□□□□□ -0.85
TUBE1-202ENST00000368662 OR10W1Q8NGF6 305 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 TMEM68Q96MH6 324 aa9.76□□□□□ -0.85
TUBE1-202ENST00000368662 A0A1B0GW64 132 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 IGLC7A0M8Q6 106 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 AMY1AP04745 511 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 OR13C7P0DN81 318 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 NPY1RP25929 384 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 HBG1P69891 147 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 HBG2P69892 147 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 WT1-ASQ06250 92 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 BSXQ3C1V8 233 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 LAMTOR1Q6IAA8 161 aa9.75□□□□□ -0.85
TUBE1-202ENST00000368662 ABHD5Q8WTS1 349 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms