RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 IGKV1-5P01602 117 aa8.81□□□□□ -1
TPM3-212ENST00000368533 PFN1P07737 140 aaKnown RBP8.81□□□□□ -1
TPM3-212ENST00000368533 GALR1P47211 349 aa8.81□□□□□ -1
TPM3-212ENST00000368533 SPINK9Q5DT21 86 aa8.81□□□□□ -1
TPM3-212ENST00000368533 DRAM1Q8N682 238 aa8.81□□□□□ -1
TPM3-212ENST00000368533 CLEC18CQ8NCF0 446 aa8.81□□□□□ -1
TPM3-212ENST00000368533 OR2D2Q9H210 308 aa8.81□□□□□ -1
TPM3-212ENST00000368533 HES4Q9HCC6 221 aa8.81□□□□□ -1
TPM3-212ENST00000368533 ZFP30Q9Y2G7 519 aa8.81□□□□□ -1
TPM3-212ENST00000368533 LOC102723971A0A1B0GUV8 181 aa8.8□□□□□ -1
TPM3-212ENST00000368533 C17orf100A8MU93 164 aa8.8□□□□□ -1
TPM3-212ENST00000368533 NDUFB8O95169 186 aa8.8□□□□□ -1
TPM3-212ENST00000368533 DLX1P56177 255 aa8.8□□□□□ -1
TPM3-212ENST00000368533 ARL16Q0P5N6 197 aa8.8□□□□□ -1
TPM3-212ENST00000368533 LEMD1Q68G75 181 aa8.8□□□□□ -1
TPM3-212ENST00000368533 DPPA3Q6W0C5 159 aa8.8□□□□□ -1
TPM3-212ENST00000368533 RNASE6Q93091 150 aaKnown RBP8.8□□□□□ -1
TPM3-212ENST00000368533 HBZP02008 142 aa8.8□□□□□ -1
TPM3-212ENST00000368533 OR10J1P30954 320 aa8.8□□□□□ -1
TPM3-212ENST00000368533 G6PCP35575 357 aa8.8□□□□□ -1
TPM3-212ENST00000368533 MDH2P40926 338 aaKnown RBP8.8□□□□□ -1
TPM3-212ENST00000368533 GALMQ96C23 342 aa8.8□□□□□ -1
TPM3-212ENST00000368533 SMDT1Q9H4I9 107 aa8.8□□□□□ -1
TPM3-212ENST00000368533 ZNRD1Q9P1U0 126 aa8.8□□□□□ -1
TPM3-212ENST00000368533 C19orf84I3L1E1 186 aa8.8□□□□□ -1
TPM3-212ENST00000368533 TNFSF4P23510 183 aa8.8□□□□□ -1
TPM3-212ENST00000368533 MOB1BQ7L9L4 216 aa8.8□□□□□ -1
TPM3-212ENST00000368533 SMIM7Q9BQ49 75 aa8.8□□□□□ -1
TPM3-212ENST00000368533 MIEN1Q9BRT3 115 aa8.8□□□□□ -1
TPM3-212ENST00000368533 NGBQ9NPG2 151 aa8.8□□□□□ -1
TPM3-212ENST00000368533 RNF7Q9UBF6 113 aa8.8□□□□□ -1
TPM3-212ENST00000368533 CHD6Q8TD26 2715 aa8.79□□□□□ -1
TPM3-212ENST00000368533 PIGBOS1A0A0B4J2F0 54 aa8.79□□□□□ -1
TPM3-212ENST00000368533 TMEM30CPA0ZSE6 113 aa8.79□□□□□ -1
TPM3-212ENST00000368533 RAMP3O60896 148 aa8.79□□□□□ -1
TPM3-212ENST00000368533 ZNF585BQ52M93 769 aa8.79□□□□□ -1
TPM3-212ENST00000368533 OR51G1Q8NGK1 321 aa8.79□□□□□ -1
TPM3-212ENST00000368533 CIB3Q96Q77 187 aaPredicted RBP8.79□□□□□ -1
TPM3-212ENST00000368533 OR4C12Q96R67 309 aa8.79□□□□□ -1
TPM3-212ENST00000368533 SLC39A9Q9NUM3 307 aa8.79□□□□□ -1
TPM3-212ENST00000368533 ZFHX3Q15911 3703 aa8.79□□□□□ -1
TPM3-212ENST00000368533 B4DEV8 164 aa8.79□□□□□ -1
TPM3-212ENST00000368533 H7BYZ3 331 aa8.79□□□□□ -1
TPM3-212ENST00000368533 CHRNA7P36544 502 aa8.79□□□□□ -1
TPM3-212ENST00000368533 SLC38A11Q08AI6 406 aa8.79□□□□□ -1
TPM3-212ENST00000368533 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
TPM3-212ENST00000368533 COL5A1-AS1Q5SY13 56 aa8.79□□□□□ -1
TPM3-212ENST00000368533 UNQ5815/PRO19632Q6UWF5 114 aa8.79□□□□□ -1
TPM3-212ENST00000368533 TCF23Q7RTU1 214 aa8.79□□□□□ -1
TPM3-212ENST00000368533 NUP37Q8NFH4 326 aa8.79□□□□□ -1
TPM3-212ENST00000368533 TMEM170AQ8WVE7 144 aa8.79□□□□□ -1
TPM3-212ENST00000368533 BBC3Q96PG8 261 aaPredicted RBP8.79□□□□□ -1
TPM3-212ENST00000368533 CLN8Q9UBY8 286 aa8.79□□□□□ -1
TPM3-212ENST00000368533 TRBV6-6A0A0A6YYG2 114 aa8.78□□□□□ -1
TPM3-212ENST00000368533 PRSS47A8MTI9 375 aa8.78□□□□□ -1
TPM3-212ENST00000368533 CNN1P51911 297 aaKnown RBP8.78□□□□□ -1
TPM3-212ENST00000368533 LYPD2Q6UXB3 125 aa8.78□□□□□ -1
TPM3-212ENST00000368533 Q6ZWC4 215 aa8.78□□□□□ -1
TPM3-212ENST00000368533 MUC15Q8N387 334 aa8.78□□□□□ -1
TPM3-212ENST00000368533 ZNF525Q8N782 197 aa8.78□□□□□ -1
TPM3-212ENST00000368533 ZNF709Q8N972 641 aa8.78□□□□□ -1
TPM3-212ENST00000368533 LHX4Q969G2 390 aa8.78□□□□□ -1
TPM3-212ENST00000368533 SLC35E1Q96K37 410 aa8.78□□□□□ -1
TPM3-212ENST00000368533 VPS25Q9BRG1 176 aa8.78□□□□□ -1
TPM3-212ENST00000368533 RBKSQ9H477 322 aa8.78□□□□□ -1
TPM3-212ENST00000368533 PATZ1Q9HBE1 687 aaKnown RBP8.78□□□□□ -1
TPM3-212ENST00000368533 IL19Q9UHD0 177 aa8.78□□□□□ -1
TPM3-212ENST00000368533 RNF212BA8MTL3 300 aa8.78□□□□□ -1
TPM3-212ENST00000368533 IGLV2-14P01704 120 aa8.78□□□□□ -1
TPM3-212ENST00000368533 ZNF295-AS1Q8N0V1 137 aa8.78□□□□□ -1
TPM3-212ENST00000368533 H1FXQ92522 213 aaKnown RBP8.78□□□□□ -1
TPM3-212ENST00000368533 LSM10Q969L4 123 aaKnown RBP8.78□□□□□ -1
TPM3-212ENST00000368533 ALKBH7Q9BT30 221 aaPredicted RBP8.78□□□□□ -1
TPM3-212ENST00000368533 GAL3ST2Q9H3Q3 398 aa8.78□□□□□ -1
TPM3-212ENST00000368533 A0A1W2PPR1 153 aa8.78□□□□□ -1
TPM3-212ENST00000368533 ZNF737O75373 536 aa8.78□□□□□ -1
TPM3-212ENST00000368533 OR5G3P0C626 314 aa8.78□□□□□ -1
TPM3-212ENST00000368533 BCL2P10415 239 aa8.78□□□□□ -1
TPM3-212ENST00000368533 MSMO1Q15800 293 aa8.78□□□□□ -1
TPM3-212ENST00000368533 OR5B12Q96R08 314 aa8.78□□□□□ -1
TPM3-212ENST00000368533 GNG12Q9UBI6 72 aa8.78□□□□□ -1
TPM3-212ENST00000368533 PSG11Q9UQ72 335 aa8.78□□□□□ -1
TPM3-212ENST00000368533 LOC105371242A0A075B767 164 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 MAP1LC3B2A6NCE7 125 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 NKX6-3A6NJ46 265 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 MAP1LC3BQ9GZQ8 125 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 SLC25A22Q9H936 323 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 A0A0U1RQK1 487 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 ODAMA1E959 279 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 KIAA1324LA8MWY0 1029 aaPredicted RBP8.77□□□□□ -1.01
TPM3-212ENST00000368533 NDUFS7O75251 213 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 CDKN1BP46527 198 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 PDLIM4P50479 330 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 MZT1Q08AG7 82 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 ZNF726P1Q15940 193 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 HAPLN4Q86UW8 402 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 GATAD1Q8WUU5 269 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 ACY3Q96HD9 319 aa8.77□□□□□ -1.01
TPM3-212ENST00000368533 FAM103A1Q9BTL3 118 aaKnown RBP8.77□□□□□ -1.01
TPM3-212ENST00000368533 VAMP8Q9BV40 100 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms