RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ZNF486Q96H40 463 aaPredicted RBP14.42□□□□□ -0.1
CKS1B-203ENST00000368439 S4R3C0 116 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 IGHV3-23P01764 117 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 TRAPPC2P0DI81 140 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 TRAPPC2BP0DI82 140 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 PI3P19957 117 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 S100GP29377 79 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 MECP2P51608 486 aaKnown RBP14.41□□□□□ -0.1
CKS1B-203ENST00000368439 TATDN3Q17R31 274 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 STEAP1BQ6NZ63 245 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 ADAMTSL5Q6ZMM2 481 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 OR1L8Q8NGR8 309 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 DIRAS2Q96HU8 199 aa14.41□□□□□ -0.1
CKS1B-203ENST00000368439 NXF2Q9GZY0 626 aaKnown RBP14.41□□□□□ -0.1
CKS1B-203ENST00000368439 MFSD2BA6NFX1 497 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 RAB3DO95716 219 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 HLA-AP01891 365 aaKnown RBP14.4□□□□□ -0.1
CKS1B-203ENST00000368439 SERPINE2P07093 398 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 DEFA4P12838 97 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 TERB2Q8NHR7 220 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 SOSTQ9BQB4 213 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 TMEM14BQ9NUH8 114 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 OR51B2Q9Y5P1 312 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 SMAD5-AS1Q9Y6J3 95 aa14.4□□□□□ -0.1
CKS1B-203ENST00000368439 C15orf61A6NNL5 157 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 GGCTO75223 188 aaKnown RBP14.39□□□□□ -0.11
CKS1B-203ENST00000368439 OR13C7P0DN81 318 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 PGAM2P15259 253 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 PPP5CP53041 499 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 MFAP2P55001 183 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 PIGPP57054 158 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 IL18Q14116 193 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 FAAP20Q6NZ36 180 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 CLEC19AQ6UXS0 136 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 HSD17B13Q7Z5P4 300 aaPredicted RBP14.39□□□□□ -0.11
CKS1B-203ENST00000368439 Q8N1Y9 231 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 GDPD1Q8N9F7 314 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 EEF1AKMT3Q96AZ1 226 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 TP53RKQ96S44 253 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 C6orf62Q9GZU0 229 aaPredicted RBP14.39□□□□□ -0.11
CKS1B-203ENST00000368439 RABL2AQ9UBK7 228 aaPredicted RBP14.39□□□□□ -0.11
CKS1B-203ENST00000368439 PRNDQ9UKY0 176 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 RABL2BQ9UNT1 228 aa14.39□□□□□ -0.11
CKS1B-203ENST00000368439 H0Y980 276 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 NOL3O60936 208 aaKnown RBP14.38□□□□□ -0.11
CKS1B-203ENST00000368439 SNAPC5O75971 98 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 OR2C1O95371 312 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 GPHB5Q86YW7 130 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 OR13C8Q8NGS7 320 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 OR5B3Q8NH48 314 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 ZNF502Q8TBZ5 544 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 LSM10Q969L4 123 aaKnown RBP14.38□□□□□ -0.11
CKS1B-203ENST00000368439 CXorf58Q96LI9 332 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 TSC22D3Q99576 134 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 THAP7Q9BT49 309 aaPredicted RBP14.38□□□□□ -0.11
CKS1B-203ENST00000368439 PEMTQ9UBM1 199 aa14.38□□□□□ -0.11
CKS1B-203ENST00000368439 TRBV7-1A0A0A6YYK4 115 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 LGALS9O00182 355 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 GSTZ1O43708 216 aaPredicted RBP14.37□□□□□ -0.11
CKS1B-203ENST00000368439 P0C879 139 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 NHLRC4P0CG21 123 aaPredicted RBP14.37□□□□□ -0.11
CKS1B-203ENST00000368439 EDN2P20800 178 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 TNFSF8P32971 234 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 ARL3P36405 182 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 SCGB2B2Q4G0G5 96 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 MARCH1Q8TCQ1 289 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 HINT2Q9BX68 163 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 FKBP11Q9NYL4 201 aa14.37□□□□□ -0.11
CKS1B-203ENST00000368439 F11RQ9Y624 299 aaKnown RBP14.37□□□□□ -0.11
CKS1B-203ENST00000368439 IZUMO1RA6ND01 250 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 IGKV1-5P01602 117 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 CLEC3BP05452 202 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 CTSDP07339 412 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-203ENST00000368439 MEF2DQ14814 521 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 H2BFWTQ7Z2G1 175 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 OR4C16Q8NGL9 310 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 MCFD2Q8NI22 146 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 ZFAND1Q8TCF1 268 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 ASCL2Q99929 193 aa14.36□□□□□ -0.11
CKS1B-203ENST00000368439 RBM38Q9H0Z9 239 aaKnown RBP14.36□□□□□ -0.11
CKS1B-203ENST00000368439 C3orf85A0A1B0GTC6 90 aa14.35□□□□□ -0.11
CKS1B-203ENST00000368439 ANKRD20A5PA0PJZ0 165 aa14.35□□□□□ -0.11
CKS1B-203ENST00000368439 C2orf70A6NJV1 201 aa14.35□□□□□ -0.11
CKS1B-203ENST00000368439 IZUMO4Q1ZYL8 232 aa14.35□□□□□ -0.11
CKS1B-203ENST00000368439 VN1R17PQ8TDU5 208 aa14.35□□□□□ -0.11
CKS1B-203ENST00000368439 RTBDNQ9BSG5 229 aaPredicted RBP14.35□□□□□ -0.11
CKS1B-203ENST00000368439 THYN1Q9P016 225 aa14.35□□□□□ -0.11
CKS1B-203ENST00000368439 FRMD6-AS1P0C7T7 363 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 AKAIN1P0CW23 69 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 UCP1P25874 307 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 SLC25A24Q6NUK1 477 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 Q8N402 240 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 OR2K2Q8NGT1 345 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 OR4A16Q8NH70 328 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 TMEM56Q96MV1 263 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 COPZ2Q9P299 210 aa14.34□□□□□ -0.11
CKS1B-203ENST00000368439 RSL24D1Q9UHA3 163 aaKnown RBP14.34□□□□□ -0.11
CKS1B-203ENST00000368439 A8MWP6 167 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 DISC1C4P0D8 188 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 F8W735 103 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms