RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CRYABP02511 175 aaKnown RBP11.71□□□□□ -0.54
CD48-201ENST00000368045 LINC00869P0C866 280 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 IRF2P14316 349 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 CEACAM8P31997 349 aaPredicted RBP11.71□□□□□ -0.54
CD48-201ENST00000368045 C2orf83Q53S99 150 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 ALKBH2Q6NS38 261 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 Q6ZS92 163 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 OR5B3Q8NH48 314 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 OCC1Q8TAD7 63 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.54
CD48-201ENST00000368045 SLC35D1Q9NTN3 355 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 BET1LQ9NYM9 111 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 IL36BQ9NZH7 164 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 IGFBP2P18065 325 aa11.7□□□□□ -0.54
CD48-201ENST00000368045 RPL31P62899 125 aaKnown RBP11.7□□□□□ -0.54
CD48-201ENST00000368045 MEF2CQ06413 473 aaPredicted RBP11.7□□□□□ -0.54
CD48-201ENST00000368045 FAM201AQ5SY85 155 aa11.7□□□□□ -0.54
CD48-201ENST00000368045 UTF1Q5T230 341 aa11.7□□□□□ -0.54
CD48-201ENST00000368045 SPATA31B1PQ5VZV4 182 aa11.7□□□□□ -0.54
CD48-201ENST00000368045 NUP37Q8NFH4 326 aa11.7□□□□□ -0.54
CD48-201ENST00000368045 AURKAIP1Q9NWT8 199 aaPredicted RBP11.7□□□□□ -0.54
CD48-201ENST00000368045 LINC00312Q9Y6C7 94 aa11.7□□□□□ -0.54
CD48-201ENST00000368045 DOCK11Q5JSL3 2073 aa11.7□□□□□ -0.54
CD48-201ENST00000368045 NKX6-3A6NJ46 265 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 CT45A6P0DMU7 189 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 CT45A5P0DMU8 189 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 CT45A7P0DMV0 189 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 IQCJQ1A5X6 159 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 LBHQ53QV2 105 aaPredicted RBP11.69□□□□□ -0.54
CD48-201ENST00000368045 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 OR1L8Q8NGR8 309 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 CCL13Q99616 98 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 PRO1933Q9H354 126 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 TECRQ9NZ01 308 aaKnown RBP11.69□□□□□ -0.54
CD48-201ENST00000368045 DIDO1Q9BTC0 2240 aaKnown RBP11.69□□□□□ -0.54
CD48-201ENST00000368045 PGPEP1LA6NFU8 196 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 CD40P25942 277 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 SELENOTP62341 195 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 DUX4L9Q6RFH8 374 aaPredicted RBP11.69□□□□□ -0.54
CD48-201ENST00000368045 PQLC2Q6ZP29 291 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 MRPL41Q8IXM3 137 aaKnown RBP11.69□□□□□ -0.54
CD48-201ENST00000368045 OSR1Q8TAX0 266 aaPredicted RBP11.69□□□□□ -0.54
CD48-201ENST00000368045 HINT2Q9BX68 163 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 GAL3ST2Q9H3Q3 398 aa11.69□□□□□ -0.54
CD48-201ENST00000368045 INS-IGF2F8WCM5 200 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 OR10J4P0C629 311 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 GNG10P50151 68 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 TAS2R45P59539 299 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 ZNF90Q03938 601 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 KRTCAP3Q53RY4 240 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 ZNF833PQ6ZTB9 187 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 FAM216BQ8N7L0 139 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 EAF1Q96JC9 268 aaPredicted RBP11.68□□□□□ -0.54
CD48-201ENST00000368045 NABP2Q9BQ15 211 aa11.68□□□□□ -0.54
CD48-201ENST00000368045 URB1O60287 2271 aaKnown RBP11.67□□□□□ -0.54
CD48-201ENST00000368045 TRBV9A0A0B4J1U6 114 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 TEX50A0A1B0GTY4 177 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 A8MWP6 167 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 K7EN84 100 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 FOXH1O75593 365 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 APOA2P02652 100 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 TNFRSF1AP19438 455 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 RPL19P84098 196 aaKnown RBP11.67□□□□□ -0.54
CD48-201ENST00000368045 MIR17HGQ75NE6 70 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 DEFB108BQ8NET1 73 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 CACNG8Q8WXS5 425 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 RNF2Q99496 336 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
CD48-201ENST00000368045 OR5G3P0C626 314 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 RPRMLQ8N4K4 120 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 FAM57AQ8TBR7 257 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 LRFN3Q9BTN0 628 aa11.67□□□□□ -0.54
CD48-201ENST00000368045 HCFC1P51610 2035 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 ZNF705GA8MUZ8 300 aaPredicted RBP11.66□□□□□ -0.54
CD48-201ENST00000368045 MMP23AO75900 390 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 SAA1P0DJI8 122 aaPredicted RBP11.66□□□□□ -0.54
CD48-201ENST00000368045 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
CD48-201ENST00000368045 ADMP35318 185 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 LGALS4P56470 323 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 PSG5Q15238 335 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 PRSS8Q16651 343 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 RPEL1Q2QD12 228 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 COX19Q49B96 90 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 FAM71F2Q6NXP2 309 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 TMEM108Q6UXF1 575 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 OR4A5Q8NH83 315 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 NDUFAF3Q9BU61 184 aa11.66□□□□□ -0.54
CD48-201ENST00000368045 MRPL32Q9BYC8 188 aaKnown RBP11.66□□□□□ -0.54
CD48-201ENST00000368045 PRR14LQ5THK1 2151 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 A0A1W2PRE2 83 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
CD48-201ENST00000368045 IGKV1-16P04430 117 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 ESDP10768 282 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 MYOD1P15172 320 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 OR10J1P30954 320 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 GNG4P50150 75 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 PAFAH1B2P68402 229 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 CD69Q07108 199 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms