RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 WBP1Q96G27 269 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 IQCF6A8MYZ5 107 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 RPL7P18124 248 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 FOXL1Q12952 345 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 MYOZ3Q8TDC0 251 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 GPHA2Q96T91 129 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 ANAPC10Q9UM13 185 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 GLRXP35754 106 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 FOXL2P58012 376 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 IGHV3OR15-7A0A075B7D8 119 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 RPL24P83731 157 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 PSG9Q00887 426 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 ZNF324BQ6AW86 544 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 OR4A5Q8NH83 315 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 LYZL4Q96KX0 146 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 SEMA5BQ9P283 1151 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 TBL2Q9Y4P3 447 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 COX7A1P24310 79 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 NAV3Q8IVL0 2385 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 CRYBB3P26998 211 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM106BQ9NUM4 274 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 SLC35B1P78383 322 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 BEND2Q8NDZ0 799 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 A0A1B0GV90 55 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 EPOPA6NHQ4 379 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 AGFG2O95081 481 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 CCL20P78556 96 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 MMDQ15546 238 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 Q1RN00 199 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 MEX3AA1L020 520 aaKnown RBP9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM189A5PLL7 270 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 GAGE10A6NGK3 116 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 IL6RP08887 468 aaPredicted RBP9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 C1orf185Q5T7R7 199 aa9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 MRPL37Q9BZE1 423 aaKnown RBP9.96□□□□□ -0.81
CDC42BPA-202ENST00000366764 SLX1AQ9BQ83 275 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 OSTCQ9NRP0 149 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 WNT5AP41221 380 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF826PQ6ZT77 177 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 PRNTQ86SH4 94 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 PEF1Q9UBV8 284 aaKnown RBP9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 KIAA1549Q9HCM3 1950 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 GRIFINA4D1Z8 144 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 ETV2O00321 342 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 CA2P00918 260 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 IZUMO4Q1ZYL8 232 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 SCGB1D4Q6XE38 83 aa9.96□□□□□ -0.82
CDC42BPA-202ENST00000366764 YPEL1O60688 119 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 CLPSP04118 112 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 SSTR5P35346 364 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 KIR2DL2P43627 348 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 PCSK4Q6UW60 755 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 FMC1Q96HJ9 113 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 YPEL2Q96QA6 119 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 WFDC1Q9HC57 220 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 GUCD1Q96NT3 240 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 PNRC2Q9NPJ4 139 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF716A6NP11 495 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 RTN4RQ9BZR6 473 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 LY96Q9Y6Y9 160 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 GCSHP23434 173 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 ASCL4Q6XD76 172 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 ITLN1Q8WWA0 313 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 TRBV23-1A0A0A0MS06 115 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 TMEM144Q7Z5S9 345 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 SHISA5Q8N114 240 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 NABP1Q96AH0 204 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 PRDM13Q9H4Q3 707 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 IGKV1D-13A0A0B4J2D9 117 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 IGKV1-13P0DP09 117 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 RND2P52198 227 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 RND1Q92730 232 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 TIMM23BQ5SRD1 257 aa9.95□□□□□ -0.82
CDC42BPA-202ENST00000366764 TRAV24A0A0B4J272 114 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 A0A1W2PRE2 83 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 IZUMO1RA6ND01 250 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 SAPCD1Q5SSQ6 148 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 TANC2Q9HCD6 1990 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 CKS2P33552 79 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 TPRX1Q8N7U7 411 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 CCL13Q99616 98 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 TMUB1Q9BVT8 246 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 CDX4O14627 284 aaPredicted RBP9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 OR2J3O76001 311 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF319Q9P2F9 582 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 KBTBD11-OT1A0A1B0GTJ5 212 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 TBR1Q16650 682 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 IGKV1D-8A0A087WSZ0 117 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 C9JCJ5 164 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 CA5BP1Q8WTZ4 195 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 IFI27L2Q9H2X8 130 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 PEX7O00628 323 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 NDUFS6O75380 124 aaKnown RBP9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 TFF3Q07654 80 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 C17orf98A8MV24 154 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 MAP1LC3AQ9H492 121 aa9.94□□□□□ -0.82
CDC42BPA-202ENST00000366764 SMOC1Q9H4F8 434 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms