RNA–Protein interactions for RNA: ENST00000366687.5

CCSAP-203, Transcript of centriole, cilia and spindle associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSAP, Length 5,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSAP-203ENST00000366687 UBE2L6O14933 153 aa17.07■□□□□ 0.32
CCSAP-203ENST00000366687 UQCR10Q9UDW1 63 aa17.07■□□□□ 0.32
CCSAP-203ENST00000366687 CREBBPQ92793 2442 aa17.07■□□□□ 0.32
CCSAP-203ENST00000366687 SPATA45Q537H7 98 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 HAX1O00165 279 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 HERPUD1Q15011 391 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 FAM159AQ6UWV7 190 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 RAB37Q96AX2 223 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 GPR82Q96P67 336 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 C21orf62Q9NYP8 219 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 HLA-DRB1P01911 266 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 IGKV1-9A0A0C4DH69 117 aa17.06■□□□□ 0.32
CCSAP-203ENST00000366687 ZNF385CQ66K41 422 aaPredicted RBP17.06■□□□□ 0.32
CCSAP-203ENST00000366687 IGHV3OR16-13A0A075B7E8 117 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 IGHV3-74A0A0B4J1X5 117 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 A0A0G2JLM5 398 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 IGFBP2P18065 325 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 HIST1H1AQ02539 215 aaPredicted RBP17.05■□□□□ 0.32
CCSAP-203ENST00000366687 DEPPQ9NTK1 212 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 FOXI3A8MTJ6 420 aaPredicted RBP17.05■□□□□ 0.32
CCSAP-203ENST00000366687 H3BVH4 76 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 IGKV1D-33P01593 117 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 IGKV1-33P01594 117 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 DUX5Q96PT3 197 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 KIR2DL4Q99706 377 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 FBXL7Q9UJT9 491 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 COL6A6A6NMZ7 2263 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 HBBP68871 147 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 NEUROG3Q9Y4Z2 214 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 CACNA1BQ00975 2339 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 ANKRD36A6QL64 1941 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 LCN2P80188 198 aa17.05■□□□□ 0.32
CCSAP-203ENST00000366687 RNASEH2CQ8TDP1 164 aaKnown RBP17.05■□□□□ 0.32
CCSAP-203ENST00000366687 ARHGEF17Q96PE2 2063 aaPredicted RBP17.04■□□□□ 0.32
CCSAP-203ENST00000366687 NTN3O00634 580 aaPredicted RBP17.04■□□□□ 0.32
CCSAP-203ENST00000366687 PLPPR1Q8TBJ4 325 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 SMIM12Q96EX1 92 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 MRPL20Q9BYC9 149 aaKnown RBP17.04■□□□□ 0.32
CCSAP-203ENST00000366687 LINC00271P0C7V0 271 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 PAPPA-AS1Q5QFB9 102 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 RNF222A6NCQ9 220 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 K7ERU9 68 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 SLC25A34Q6PIV7 304 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 RNASE6Q93091 150 aaKnown RBP17.04■□□□□ 0.32
CCSAP-203ENST00000366687 MED12Q93074 2177 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 YPEL1O60688 119 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 OR10S1Q8NGN2 331 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 YPEL2Q96QA6 119 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 SIPA1L1O43166 1804 aa17.04■□□□□ 0.32
CCSAP-203ENST00000366687 CGAP01215 116 aa17.03■□□□□ 0.32
CCSAP-203ENST00000366687 ERASQ7Z444 233 aa17.03■□□□□ 0.32
CCSAP-203ENST00000366687 FAM89BQ8N5H3 189 aa17.03■□□□□ 0.32
CCSAP-203ENST00000366687 MTCL1Q9Y4B5 1905 aaKnown RBP17.03■□□□□ 0.32
CCSAP-203ENST00000366687 EFNB1P98172 346 aa17.03■□□□□ 0.32
CCSAP-203ENST00000366687 CFHR1Q03591 330 aa17.03■□□□□ 0.32
CCSAP-203ENST00000366687 SEMA5BQ9P283 1151 aa17.03■□□□□ 0.32
CCSAP-203ENST00000366687 CARHSP1Q9Y2V2 147 aaKnown RBP17.03■□□□□ 0.32
CCSAP-203ENST00000366687 A0A0B4J293 547 aa17.03■□□□□ 0.32
CCSAP-203ENST00000366687 RAXQ9Y2V3 346 aa17.03■□□□□ 0.32
CCSAP-203ENST00000366687 WNK2Q9Y3S1 2297 aa17.02■□□□□ 0.32
CCSAP-203ENST00000366687 FOXA2Q9Y261 457 aaPredicted RBP17.02■□□□□ 0.32
CCSAP-203ENST00000366687 PRSS2P07478 247 aa17.02■□□□□ 0.32
CCSAP-203ENST00000366687 TFF3Q07654 80 aa17.02■□□□□ 0.32
CCSAP-203ENST00000366687 FAM168AQ92567 244 aa17.02■□□□□ 0.32
CCSAP-203ENST00000366687 OTOFQ9HC10 1997 aa17.02■□□□□ 0.32
CCSAP-203ENST00000366687 FAM74A4Q5TZK3 123 aa17.02■□□□□ 0.31
CCSAP-203ENST00000366687 OR52E5Q8NH55 327 aa17.02■□□□□ 0.31
CCSAP-203ENST00000366687 GRIFINA4D1Z8 144 aa17.02■□□□□ 0.31
CCSAP-203ENST00000366687 ZNF525Q8N782 197 aa17.02■□□□□ 0.31
CCSAP-203ENST00000366687 DOCK6Q96HP0 2047 aa17.02■□□□□ 0.31
CCSAP-203ENST00000366687 TRBV20OR9-2A0A075B6H5 130 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 PRR32B1ATL7 298 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 PPP1R27Q86WC6 154 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 ARPC1AQ92747 370 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 RBFOX2O43251 390 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCSAP-203ENST00000366687 CBLN1P23435 193 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 TMEM144Q7Z5S9 345 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 SRP19P09132 144 aaKnown RBP17.01■□□□□ 0.31
CCSAP-203ENST00000366687 ZNF56Q15929 161 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 FAM181BA6NEQ2 426 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 FBLL1A6NHQ2 334 aaKnown RBP17.01■□□□□ 0.31
CCSAP-203ENST00000366687 J3QRE1 110 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 HINT1P49773 126 aaPredicted RBP17.01■□□□□ 0.31
CCSAP-203ENST00000366687 ZIC4Q8N9L1 334 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 TEX45Q8NA69 505 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 LYZL4Q96KX0 146 aa17.01■□□□□ 0.31
CCSAP-203ENST00000366687 WDR82Q6UXN9 313 aa17■□□□□ 0.31
CCSAP-203ENST00000366687 SLC25A28Q96A46 364 aa17■□□□□ 0.31
CCSAP-203ENST00000366687 ZNF319Q9P2F9 582 aa17■□□□□ 0.31
CCSAP-203ENST00000366687 PEX7O00628 323 aa17■□□□□ 0.31
CCSAP-203ENST00000366687 CCL3L1P16619 93 aa17■□□□□ 0.31
CCSAP-203ENST00000366687 KLK15Q9H2R5 256 aa17■□□□□ 0.31
CCSAP-203ENST00000366687 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
CCSAP-203ENST00000366687 IGKV1D-13A0A0B4J2D9 117 aa17■□□□□ 0.31
CCSAP-203ENST00000366687 IGKV1-13P0DP09 117 aa17■□□□□ 0.31
CCSAP-203ENST00000366687 C17orf82Q86X59 251 aaPredicted RBP17■□□□□ 0.31
CCSAP-203ENST00000366687 LOC107984156A0A0G2JMH3 177 aa16.99■□□□□ 0.31
CCSAP-203ENST00000366687 FABP2P12104 132 aa16.99■□□□□ 0.31
CCSAP-203ENST00000366687 ARL17AQ8IVW1 177 aa16.99■□□□□ 0.31
CCSAP-203ENST00000366687 OR4D5Q8NGN0 318 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms