RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 DUXBA0A1W2PPF3 345 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 ATP6V0CP27449 155 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 NKX2-1P43699 371 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-203ENST00000366666 GPR12P47775 334 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 GAGE1Q13065 139 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 SPSB3Q6PJ21 355 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 SPNS3Q6ZMD2 512 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 TMEM56Q96MV1 263 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 POLR3KQ9Y2Y1 108 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-203ENST00000366666 TMEM56-RWDD3S4R434 201 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 ACANP16112 2415 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 OTOGQ6ZRI0 2925 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 TLN2Q9Y4G6 2542 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 H3BQ15 152 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 PPP1R2P9O14990 202 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 HSPB1P04792 205 aaKnown RBP9.92□□□□□ -0.82
CAPN9-203ENST00000366666 SRP19P09132 144 aaKnown RBP9.92□□□□□ -0.82
CAPN9-203ENST00000366666 ZNF16P17020 682 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-203ENST00000366666 REG1BP48304 166 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 RND3P61587 244 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 DPPA3Q6W0C5 159 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 CMTM1Q8IZ96 169 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 TBX15Q96SF7 602 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 RARRES2Q99969 163 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 TMEM222Q9H0R3 208 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 LYRM2Q9NU23 88 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-203ENST00000366666 INSIG2Q9Y5U4 225 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 CSPG4Q6UVK1 2322 aa9.92□□□□□ -0.82
CAPN9-203ENST00000366666 FAM24AA6NFZ4 105 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 M0R1W7 72 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 RAMP3O60896 148 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 IGLV1-47P01700 117 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 RBP4P02753 201 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 F2RP25116 425 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 RPS10P46783 165 aaKnown RBP9.91□□□□□ -0.82
CAPN9-203ENST00000366666 NDUFA6P56556 154 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 BAXQ07812 192 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 C21orf62-AS1Q17RA5 79 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 NCR3LG1Q68D85 454 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 M0R1X1 148 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 ITGB1BP1O14713 200 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 HBE1P02100 147 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 MSMBP08118 114 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 LINC00614P0C842 121 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 HOXB4P17483 251 aaPredicted RBP9.91□□□□□ -0.82
CAPN9-203ENST00000366666 FGF7P21781 194 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 PRTN3P24158 256 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 TAGLN2P37802 199 aaKnown RBP9.91□□□□□ -0.82
CAPN9-203ENST00000366666 VAMP2P63027 116 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 TMEM30BQ3MIR4 351 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 ZNF506Q5JVG8 444 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 PRSS57Q6UWY2 283 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 TMEM252Q8N6L7 170 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 OR9G1Q8NH87 305 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 ZNF596Q8TC21 504 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 CLEC7AQ9BXN2 247 aa9.91□□□□□ -0.82
CAPN9-203ENST00000366666 SETXQ7Z333 2677 aaKnown RBP9.9□□□□□ -0.82
CAPN9-203ENST00000366666 RAB29O14966 203 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 TOX4O94842 621 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 DUTP33316 252 aaKnown RBP9.9□□□□□ -0.82
CAPN9-203ENST00000366666 RAB7AP51149 207 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 UBE2KP61086 200 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 CCL20P78556 96 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 LOXL1Q08397 574 aaPredicted RBP9.9□□□□□ -0.82
CAPN9-203ENST00000366666 ZNF585BQ52M93 769 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 LHFPL4Q7Z7J7 247 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 ZNF695Q8IW36 515 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 KIR3DL3Q8N743 410 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 OR4P4Q8NGL7 312 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 OR10G4Q8NGN3 311 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 OR10X1Q8NGY0 326 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 RNASEH2CQ8TDP1 164 aaKnown RBP9.9□□□□□ -0.82
CAPN9-203ENST00000366666 ST6GALNAC6Q969X2 333 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 TVP23CQ96ET8 276 aa9.9□□□□□ -0.82
CAPN9-203ENST00000366666 B4DEV8 164 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 TGOLN2O43493 480 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 SCAF4O95104 1147 aaKnown RBP9.9□□□□□ -0.83
CAPN9-203ENST00000366666 AVPP01185 164 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 IGKV1-39P01597 117 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 IGKV1D-39P04432 117 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 PAX8Q06710 450 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 USF2Q15853 346 aaPredicted RBP9.9□□□□□ -0.83
CAPN9-203ENST00000366666 HLA-DRB5Q30154 266 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 SLC35E3Q7Z769 313 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 ZNF429Q86V71 674 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 SELENOHQ8IZQ5 122 aaKnown RBP9.9□□□□□ -0.83
CAPN9-203ENST00000366666 LINC00311Q8N616 119 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 HIF1ANQ9NWT6 349 aa9.9□□□□□ -0.83
CAPN9-203ENST00000366666 PIGBOS1A0A0B4J2F0 54 aa9.89□□□□□ -0.83
CAPN9-203ENST00000366666 B4DSR2 109 aa9.89□□□□□ -0.83
CAPN9-203ENST00000366666 ID3Q02535 119 aa9.89□□□□□ -0.83
CAPN9-203ENST00000366666 ELOBQ15370 118 aa9.89□□□□□ -0.83
CAPN9-203ENST00000366666 C1orf122Q6ZSJ8 110 aa9.89□□□□□ -0.83
CAPN9-203ENST00000366666 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
CAPN9-203ENST00000366666 LHX4Q969G2 390 aa9.89□□□□□ -0.83
CAPN9-203ENST00000366666 GPR61Q9BZJ8 451 aa9.89□□□□□ -0.83
CAPN9-203ENST00000366666 PRO1933Q9H354 126 aa9.89□□□□□ -0.83
CAPN9-203ENST00000366666 IGHV3OR16-10A0A075B7F0 116 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms