RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 WFDC11Q8NEX6 87 aa-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 Q8WTZ3 238 aa-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 KIAA1143Q96AT1 154 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 SMIM12Q96EX1 92 aa-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 ERMAPQ96PL5 475 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 SLC50A1Q9BRV3 221 aa-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 RNF11Q9Y3C5 154 aa-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 U3KQ87 197 aa-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 CHD2O14647 1828 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 DOPEY2Q9Y3R5 2298 aa-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 MAP1AP78559 2803 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 HIVEP1P15822 2718 aa-0.53□□□□□ -2.49
RNU6-1048P-201ENST00000364054 CHD5Q8TDI0 1954 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 BCL9O00512 1426 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 NF1P21359 2839 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 ABCC12Q96J65 1359 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 ZNF292O60281 2723 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CCDC160A6NGH7 325 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 GPR31O00270 319 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 ACOX3O15254 700 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 KLF7O75840 302 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SC5DO75845 299 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CLPSP04118 112 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 STAG3L3P0CL85 134 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 NQO2P16083 231 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SRMP19623 302 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 AQP5P55064 265 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CNBPP62633 177 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 FLOT2Q14254 428 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CLEC12BQ2HXU8 276 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 LINC01554Q52M75 96 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SPANXN5Q5MJ07 72 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 ZNF550Q7Z398 422 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 C1orf174Q8IYL3 243 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CCDC12Q8WUD4 166 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SFT2D1Q8WV19 159 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 MITD1Q8WV92 249 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 RASSF5Q8WWW0 418 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 C11orf40Q8WZ69 217 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CIDECQ96AQ7 238 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CATSPER2Q96P56 530 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 PRRG3Q9BZD7 231 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 IMUPQ9GZP8 106 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 LPAR5Q9H1C0 372 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 MAT2BQ9NZL9 334 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 COQ4Q9Y3A0 265 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 TIMM22Q9Y584 194 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 ACANP16112 2415 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 PKD1L1Q8TDX9 2849 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 LAMC3Q9Y6N6 1575 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 APC2O95996 2303 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CCDC88AQ3V6T2 1871 aa-0.54□□□□□ -2.5
RNU6-1048P-201ENST00000364054 F8P00451 2351 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SCN10AQ9Y5Y9 1956 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 FLNBO75369 2602 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 NHSL1Q5SYE7 1610 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 TRAV12-1A0A0B4J245 112 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 IGHV1-58A0A0C4DH39 117 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 TMEM269A0A1B0GVZ9 245 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 F5H5K5 113 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 M0R381 172 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CCL16O15467 120 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 KDELR3O43731 214 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 NUPR1O60356 82 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 TFPTP0C1Z6 253 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 BAALC-AS2P0C853 105 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 MIFP14174 115 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 FKBP2P26885 142 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 MIPP30301 263 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CD151P48509 253 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 RPL37P61927 97 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 RBM3P98179 157 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 COX6A2Q02221 97 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SPINK13Q1W4C9 94 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 LCN8Q6JVE9 175 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 Q6ZQY7 126 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 DEFB128Q7Z7B8 93 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SPATA24Q86W54 205 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 LRRC6Q86X45 466 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 TBC1D19Q8N5T2 526 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 RNASE6Q93091 150 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 TMEM106AQ96A25 262 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 OPTNQ96CV9 577 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 FBXO44Q9H4M3 255 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 IFT46Q9NQC8 304 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 RSL24D1Q9UHA3 163 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 HSPB8Q9UJY1 196 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 PSME2Q9UL46 239 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 TAF1LQ8IZX4 1826 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 EP300Q09472 2414 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 CECR2Q9BXF3 1484 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 HEATR5AQ86XA9 2040 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SCN3AQ9NY46 2000 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 KDM6AO15550 1401 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 RIC1Q4ADV7 1423 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 TNS3Q68CZ2 1445 aa-0.55□□□□□ -2.5
RNU6-1048P-201ENST00000364054 KNTC1P50748 2209 aa-0.56□□□□□ -2.5
RNU6-1048P-201ENST00000364054 LRP1BQ9NZR2 4599 aa-0.56□□□□□ -2.5
RNU6-1048P-201ENST00000364054 SBF1O95248 1867 aa-0.56□□□□□ -2.5
RNU6-1048P-201ENST00000364054 NEBP20929 6669 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms