RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 DEFA4P12838 97 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 IL11P20809 199 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 TAS2R45P59539 299 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 ATP5G2Q06055 141 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 FXYD3Q14802 87 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 WIPI1Q5MNZ9 446 aaPredicted RBP9.62□□□□□ -0.87
CNOT4-203ENST00000361528 PQLC2Q6ZP29 291 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 FOXL2NBQ6ZUU3 175 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 FAM231DQ6ZW35 169 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 OOSP2Q86WS3 158 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 WNT6Q9Y6F9 365 aa9.62□□□□□ -0.87
CNOT4-203ENST00000361528 IGKV1-12A0A0C4DH73 117 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 IGKV1D-12P01611 117 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 MFAP2P55001 183 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 FAM110CQ1W6H9 321 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 SSX8Q7RTT4 187 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 NXF5Q9H1B4 397 aaKnown RBP9.61□□□□□ -0.87
CNOT4-203ENST00000361528 CDIP1Q9H305 208 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 ALKBH4Q9NXW9 302 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 CENPFP49454 3210 aa9.61□□□□□ -0.87
CNOT4-203ENST00000361528 TEX50A0A1B0GTY4 177 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 hCG_38984A0A1B0GV85 526 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 C5orf63A6NC05 138 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 P04436 131 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 GUSBP1Q15486 140 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 PDLIM3Q53GG5 364 aaPredicted RBP9.6□□□□□ -0.87
CNOT4-203ENST00000361528 PSMG4Q5JS54 123 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 Q6ZUT4 128 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 ANKRD37Q7Z713 158 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 GJC3Q8NFK1 279 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 C1QTNF4Q9BXJ3 329 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 SHANK1Q9Y566 2161 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 ALPK2Q86TB3 2170 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 IGKV1-6A0A0C4DH72 117 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 NPIPB11E5RHQ5 1161 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 RRHO14718 337 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 WISP1O95388 367 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 CELA2BP08218 269 aaPredicted RBP9.6□□□□□ -0.87
CNOT4-203ENST00000361528 EDDM3BP56851 147 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 FOXE3Q13461 319 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 ETDBQ3ZM63 59 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 GCSAMLQ5JQS6 135 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 LY6G5CQ5SRR4 150 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 ABHD17BQ5VST6 288 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 PCSK4Q6UW60 755 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 PRR22Q8IZ63 422 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 ZNF611Q8N823 705 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 C8orf46Q8TAG6 207 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 EMC6Q9BV81 110 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 HCSTQ9UBK5 93 aa9.6□□□□□ -0.87
CNOT4-203ENST00000361528 TRBV6-6A0A0A6YYG2 114 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.59□□□□□ -0.87
CNOT4-203ENST00000361528 C2CD4DB7Z1M9 353 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 E9PLD3 99 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 NRG2O14511 850 aaPredicted RBP9.59□□□□□ -0.87
CNOT4-203ENST00000361528 CEACAM5P06731 702 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 CDAP32320 146 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 FKBP1BP68106 108 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 ZXDAP98168 799 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 TMEM42Q69YG0 159 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 SFTPA2Q8IWL1 248 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 SFTPA1Q8IWL2 248 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 ST8SIA1Q92185 356 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 CITED2Q99967 270 aaPredicted RBP9.59□□□□□ -0.87
CNOT4-203ENST00000361528 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.59□□□□□ -0.87
CNOT4-203ENST00000361528 OR1A1Q9P1Q5 309 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 A0A1B0GXF2 115 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 FBLL1A6NHQ2 334 aaKnown RBP9.59□□□□□ -0.87
CNOT4-203ENST00000361528 CLDN14O95500 239 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 GABRG2P18507 467 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 FBXW4P57775 412 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 MFAP5Q13361 173 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 RTL8BQ17RB0 113 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 FGFRL1Q8N441 504 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 TM2D2Q9BX73 214 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 TMEM133Q9H2Q1 129 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
CNOT4-203ENST00000361528 SOX21Q9Y651 276 aaPredicted RBP9.59□□□□□ -0.87
CNOT4-203ENST00000361528 SH2D7A6NKC9 451 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-203ENST00000361528 SNAI2O43623 268 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 IGLV2-8P01709 118 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 ARL4DP49703 201 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 ZFAND6Q6FIF0 208 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 NUP35Q8NFH5 326 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 SPTSSAQ969W0 71 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 IDI2-AS1Q9NZ38 188 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 HIGD1BQ9P298 99 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 SLC25A10Q9UBX3 287 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-203ENST00000361528 GAGE12JA6NER3 117 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 GAGE7O76087 117 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 MT-ATP8P03928 68 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 VDAC2P45880 294 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-203ENST00000361528 FOXI1Q12951 378 aa9.58□□□□□ -0.88
CNOT4-203ENST00000361528 GAGE4Q13068 117 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms