RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 HOXB1P14653 301 aaPredicted RBP7.95□□□□□ -1.14
VPS13A-203ENST00000360280 CD69Q07108 199 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 TRIP6Q15654 476 aaKnown RBP7.95□□□□□ -1.14
VPS13A-203ENST00000360280 UCN2Q96RP3 112 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 CCL13Q99616 98 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 PHF3Q92576 2039 aaKnown RBP7.95□□□□□ -1.14
VPS13A-203ENST00000360280 VN1R4Q7Z5H5 301 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 EDA2RQ9HAV5 297 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 TCF19Q9Y242 345 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 ADAMTSL1Q8N6G6 1762 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 R4GN57 208 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 C9JCJ5 164 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 GNB1LQ9BYB4 327 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 CHCHD1Q96BP2 118 aaKnown RBP7.95□□□□□ -1.14
VPS13A-203ENST00000360280 SSBP2P81877 361 aaPredicted RBP7.95□□□□□ -1.14
VPS13A-203ENST00000360280 ZIC1Q15915 447 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 MORN3Q6PF18 240 aaPredicted RBP7.95□□□□□ -1.14
VPS13A-203ENST00000360280 ZNF818PQ6ZRF7 136 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 OR9G4Q8NGQ1 327 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 TNRC6AQ8NDV7 1962 aaKnown RBP7.95□□□□□ -1.14
VPS13A-203ENST00000360280 LINC01465Q8N7H1 131 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 NPIPB11E5RHQ5 1161 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 ICAM4Q14773 271 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 COQ2Q96H96 371 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 C2CD4DB7Z1M9 353 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 TMEM155Q4W5P6 130 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 FAM19A2Q8N3H0 131 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 ZNF124Q15973 351 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 C3AR1Q16581 482 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 WNT2BQ93097 391 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.95□□□□□ -1.14
VPS13A-203ENST00000360280 FAM89BQ8N5H3 189 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 ZNF479Q96JC4 524 aa7.95□□□□□ -1.14
VPS13A-203ENST00000360280 TDGF1P3P51864 188 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 NBEAP1P0C6P0 100 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 HOXD3P31249 432 aaPredicted RBP7.94□□□□□ -1.14
VPS13A-203ENST00000360280 ST6GALNAC6Q969X2 333 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 SPINK2P20155 84 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 TMEM190Q8WZ59 177 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 IMMP2LQ96T52 175 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 NYNRINQ9P2P1 1898 aaKnown RBP7.94□□□□□ -1.14
VPS13A-203ENST00000360280 LOC390937A0A1W2PQ73 354 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 TUBA4BQ9H853 241 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.94□□□□□ -1.14
VPS13A-203ENST00000360280 DCAF10Q5QP82 559 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 ST20Q9HBF5 79 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 LINC00587B1AMM8 73 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 CEP290O15078 2479 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 MYF5P13349 255 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 RCC1LQ96I51 464 aaKnown RBP7.94□□□□□ -1.14
VPS13A-203ENST00000360280 TRAV9-2A0A087WT02 112 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 TRBV5-5A0A0J9YX44 114 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 A0A1W2PRS3 328 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 VWC2LB2RUY7 222 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 PGFP49763 221 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 PPBPP02775 128 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 TMPRSS3P57727 454 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 SIGLEC14Q08ET2 396 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 IGKCP01834 107 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 TTTY12Q9BZ98 90 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 SMPXQ9UHP9 88 aa7.94□□□□□ -1.14
VPS13A-203ENST00000360280 A0A0G2JLM5 398 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 VKORC1Q9BQB6 163 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 SPANXDQ9BXN6 97 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 SERF1AO75920 110 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 NRN1Q9NPD7 142 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 LOXL4Q96JB6 756 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 EPDR1Q9UM22 224 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 TRGV2A0A075B6R0 118 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 TMEM240Q5SV17 173 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 CGAP01215 116 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 OR9G1Q8NH87 305 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 CCL3P10147 92 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 DNAJC30Q96LL9 226 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 NGFRP08138 427 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 ATP5L2Q7Z4Y8 100 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 TEX45Q8NA69 505 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 UCNP55089 124 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 TPRX1Q8N7U7 411 aa7.93□□□□□ -1.14
VPS13A-203ENST00000360280 SEPSECSQ9HD40 501 aaKnown RBP7.93□□□□□ -1.14
VPS13A-203ENST00000360280 PRR33A8MZF0 331 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 ASCL2Q99929 193 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 RPRMQ9NS64 109 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 SFTA2Q6UW10 78 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 C9orf40Q8IXQ3 194 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 DLL3Q9NYJ7 618 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 PLXNA2O75051 1894 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 CCL21O00585 134 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 MOSP00540 346 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 HOXB3P14651 431 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 ZFP36L2P47974 494 aaKnown RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 CT83Q5H943 113 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 C16orf47Q6ZP98 133 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 FAM214BQ7L5A3 538 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 VGLL1Q99990 258 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 CHTOPQ9Y3Y2 248 aaKnown RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 TRAV5A0A0B4J249 113 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 DLX4Q92988 240 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 SCARF2Q96GP6 870 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms