RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 TIMM9Q9Y5J7 89 aa8.72□□□□□ -1.01
TRAPPC4-201ENST00000359005 IGHV1-3A0A0C4DH29 117 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 BTBD17A6NE02 478 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 C22orf46C9J442 243 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 KRBOX1C9JBD0 128 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 H3BP45 60 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 FBXO24O75426 580 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 TOX4O94842 621 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 HBE1P02100 147 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 COX7A1P24310 79 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 CD1BP29016 333 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 PRCDQ00LT1 54 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 TMEM267Q0VDI3 215 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 EIF4E3Q8N5X7 224 aaKnown RBP8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 HSD17B11Q8NBQ5 300 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 OR2G3Q8NGZ4 309 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 C10orf105Q8TEF2 133 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 MARC2Q969Z3 335 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 BPESC1Q9GZL8 116 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 KIAA1456Q9P272 454 aa8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 YLPM1P49750 1951 aaKnown RBP8.71□□□□□ -1.02
TRAPPC4-201ENST00000359005 FNDC10F2Z333 226 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 INS-IGF2F8WCM5 200 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 TMEM50AO95807 157 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 TSPAN15O95858 294 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 IFNA4P05014 189 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 IL6RP08887 468 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 GATA3P23771 443 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 BRS3P32247 399 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 REG1BP48304 166 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 UBE2E1P51965 193 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 DVL1P1P54792 670 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 LRRC75BQ2VPJ9 315 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 TPTE2P1Q5T6R2 138 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 OR8G2PQ6IF36 304 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 VMO1Q7Z5L0 202 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 SLC24A4Q8NFF2 622 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 OR4P4Q8NGL7 312 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 CLDND2Q8NHS1 167 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 MDFIQ99750 246 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 MMP26Q9NRE1 261 aa8.7□□□□□ -1.02
TRAPPC4-201ENST00000359005 CYB5BO43169 146 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 SAA1P0DJI8 122 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 NPY1RP25929 384 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 ATP6V0CP27449 155 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 LINC00205P59089 165 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 LMO4P61968 165 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 LCN2P80188 198 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 DLK1P80370 383 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 PLGLAQ15195 96 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 FAM74A1Q5RGS3 127 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 ETV3LQ6ZN32 361 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 C1orf229Q6ZS94 237 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 VKORC1L1Q8N0U8 176 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 Q8N7P7 452 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 OR2T10Q8NGZ9 312 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 MALSU1Q96EH3 234 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 SRSF8Q9BRL6 282 aaKnown RBP8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 HINT2Q9BX68 163 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 C1RLQ9NZP8 487 aa8.69□□□□□ -1.02
TRAPPC4-201ENST00000359005 TEX50A0A1B0GTY4 177 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 ODF3BA8MYP8 253 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 LY6LH3BQJ8 138 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 I3L521 148 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 MOSP00540 346 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 SNRNP70P08621 437 aaKnown RBP8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 FAM157CP0CG43 387 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 VDAC2P45880 294 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 PXDC1Q5TGL8 231 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 ETFRF1Q6IPR1 90 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 Q6ZRG5 221 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 THNSL2Q86YJ6 484 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 OR1L6Q8NGR2 347 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 C22orf15Q8WYQ4 148 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 TAF15Q92804 592 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 ZDHHC16Q969W1 377 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 WDR61Q9GZS3 305 aaKnown RBP8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 SMDT1Q9H4I9 107 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 WFDC1Q9HC57 220 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 NPVFQ9HCQ7 196 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 SIRT7Q9NRC8 400 aa8.68□□□□□ -1.02
TRAPPC4-201ENST00000359005 MFSD2BA6NFX1 497 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 VWC2LB2RUY7 222 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 CORTO00230 105 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 FAM106CPP0CH98 169 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 ZNF616Q08AN1 781 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 PJVKQ0ZLH3 352 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 AANATQ16613 207 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 VWC2Q2TAL6 325 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 C2orf83Q53S99 150 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 UTF1Q5T230 341 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 TMEM182Q6ZP80 229 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 RNASEH2CQ8TDP1 164 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 CACNG8Q8WXS5 425 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 RBMXL1Q96E39 390 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 OR4C12Q96R67 309 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 SIRPDQ9H106 197 aa8.67□□□□□ -1.02
TRAPPC4-201ENST00000359005 MXRA5Q9NR99 2828 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms