RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 LINC00310P59036 64 aa14.57□□□□□ -0.08
RTN4-204ENST00000357732 OR10J3Q5JRS4 329 aa14.57□□□□□ -0.08
RTN4-204ENST00000357732 PLA2G2CQ5R387 149 aa14.57□□□□□ -0.08
RTN4-204ENST00000357732 OR4A47Q6IF82 309 aa14.57□□□□□ -0.08
RTN4-204ENST00000357732 PQLC2Q6ZP29 291 aa14.57□□□□□ -0.08
RTN4-204ENST00000357732 OSTCQ9NRP0 149 aa14.57□□□□□ -0.08
RTN4-204ENST00000357732 SAA2-SAA4A0A096LPE2 208 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 A0A1B0GUS0 222 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 GNG4P50150 75 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 HLA-DRB5Q30154 266 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 TOMM20LQ6UXN7 152 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 OR4P4Q8NGL7 312 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 TECRQ9NZ01 308 aaKnown RBP14.56□□□□□ -0.08
RTN4-204ENST00000357732 NCOR1O75376 2440 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 IGHV1-18A0A0C4DH31 117 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 PRR33A8MZF0 331 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 CX3CL1P78423 397 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 BAGE3Q86Y29 109 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 BAGE2Q86Y30 109 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 OR2Z1Q8NG97 314 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 FAM234AQ9H0X4 552 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 FZR1Q9UM11 496 aa14.56□□□□□ -0.08
RTN4-204ENST00000357732 HELTA6NFD8 242 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 CA2P00918 260 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 LINC00869P0C866 280 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 TAS2R45P59539 299 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 CACNA1DQ01668 2161 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 SNURFLB1AK76 121 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 ISLRO14498 428 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 KRTCAP3Q53RY4 240 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 SPATA31B1PQ5VZV4 182 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 SARAFQ96BY9 339 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 LOXL4Q96JB6 756 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 HSPB9Q9BQS6 159 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 PARD6AQ9NPB6 346 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 IDI2-AS1Q9NZ38 188 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 KNTC1P50748 2209 aa14.55□□□□□ -0.08
RTN4-204ENST00000357732 SLC17A3O00476 420 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 CRYABP02511 175 aaKnown RBP14.54□□□□□ -0.08
RTN4-204ENST00000357732 OR5G3P0C626 314 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 VWA1Q6PCB0 445 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 VAMP8Q9BV40 100 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 SAMD10Q9BYL1 202 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 KBTBD11-OT1A0A1B0GTJ5 212 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 LHBP01229 141 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 RPLP1P05386 114 aaKnown RBP14.54□□□□□ -0.08
RTN4-204ENST00000357732 HNF1AP20823 631 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 BRS3P32247 399 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 IER3P46695 156 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 PRCDQ00LT1 54 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 TIGITQ495A1 244 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 CENPWQ5EE01 88 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 LRFN3Q9BTN0 628 aa14.54□□□□□ -0.08
RTN4-204ENST00000357732 TET2Q6N021 2002 aaPredicted RBP14.53□□□□□ -0.08
RTN4-204ENST00000357732 A0A1W2PRE2 83 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 CGAP01215 116 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 IGHV3-13P01766 116 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 SAA2P0DJI9 122 aaPredicted RBP14.53□□□□□ -0.08
RTN4-204ENST00000357732 IGFBP2P18065 325 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 C17orf58Q2M2W7 97 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 C9orf106Q8NAJ2 232 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 OR4B1Q8NGF8 309 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 NABP2Q9BQ15 211 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 PLEKHA3Q9HB20 300 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 ZNF586Q9NXT0 402 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 OR51B2Q9Y5P1 312 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 FOXH1O75593 365 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 MMP23AO75900 390 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 REG1AP05451 166 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 GAGE1Q13065 139 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 PSG5Q15238 335 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 CT45A1Q5HYN5 189 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 LRP11Q86VZ4 500 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 SIGLECL1Q8N7X8 197 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 CT45A3Q8NHU0 189 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 RNF2Q99496 336 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 LINC00574Q9H8X3 128 aa14.53□□□□□ -0.08
RTN4-204ENST00000357732 ZNF71Q9NQZ8 489 aaPredicted RBP14.53□□□□□ -0.08
RTN4-204ENST00000357732 URB1O60287 2271 aaKnown RBP14.53□□□□□ -0.08
RTN4-204ENST00000357732 C3orf36Q3SXR2 165 aa14.52□□□□□ -0.08
RTN4-204ENST00000357732 C2orf83Q53S99 150 aa14.52□□□□□ -0.08
RTN4-204ENST00000357732 ZNF705AQ6ZN79 300 aaPredicted RBP14.52□□□□□ -0.08
RTN4-204ENST00000357732 MIR17HGQ75NE6 70 aa14.52□□□□□ -0.08
RTN4-204ENST00000357732 FAM222BQ8WU58 562 aa14.52□□□□□ -0.08
RTN4-204ENST00000357732 PLPPR2Q96GM1 343 aa14.52□□□□□ -0.08
RTN4-204ENST00000357732 PRRC2CQ9Y520 2896 aaKnown RBP14.52□□□□□ -0.09
RTN4-204ENST00000357732 HLA-DQA1P01909 254 aa14.52□□□□□ -0.09
RTN4-204ENST00000357732 MRPS11P82912 194 aaKnown RBP14.52□□□□□ -0.09
RTN4-204ENST00000357732 BHLHA15Q7RTS1 189 aaPredicted RBP14.52□□□□□ -0.09
RTN4-204ENST00000357732 OR8I2Q8N0Y5 310 aa14.52□□□□□ -0.09
RTN4-204ENST00000357732 MRPL32Q9BYC8 188 aaKnown RBP14.52□□□□□ -0.09
RTN4-204ENST00000357732 M0R296 226 aa14.51□□□□□ -0.09
RTN4-204ENST00000357732 GPX1P07203 203 aa14.51□□□□□ -0.09
RTN4-204ENST00000357732 GATA4P43694 442 aa14.51□□□□□ -0.09
RTN4-204ENST00000357732 RASL11AQ6T310 242 aa14.51□□□□□ -0.09
RTN4-204ENST00000357732 ZNRF1Q8ND25 227 aa14.51□□□□□ -0.09
RTN4-204ENST00000357732 ZNF439Q8NDP4 499 aa14.51□□□□□ -0.09
RTN4-204ENST00000357732 SPENQ96T58 3664 aaKnown RBP14.51□□□□□ -0.09
RTN4-204ENST00000357732 ATG101Q9BSB4 218 aa14.51□□□□□ -0.09
RTN4-204ENST00000357732 PROCRQ9UNN8 238 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms