RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 IL36BQ9NZH7 164 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 TFF3Q07654 80 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 LOC101059948A0A1B0GTJ6 334 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 SCO2A0A1W2PP80 73 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 RBMY1BA6NDE4 496 aaKnown RBP13.61□□□□□ -0.23
RXRA-201ENST00000356384 RBMY1EA6NEQ0 496 aaKnown RBP13.61□□□□□ -0.23
RXRA-201ENST00000356384 TMEM14DPA8MWL7 114 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 VENTXO95231 258 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 RBMY1DP0C7P1 496 aaKnown RBP13.61□□□□□ -0.23
RXRA-201ENST00000356384 RBMY1A1P0DJD3 496 aaKnown RBP13.61□□□□□ -0.23
RXRA-201ENST00000356384 RBMY1CP0DJD4 496 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 RSPO4Q2I0M5 234 aaPredicted RBP13.61□□□□□ -0.23
RXRA-201ENST00000356384 RGPD4Q7Z3J3 1758 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 GPR183P32249 361 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 C1QTNF12Q5T7M4 302 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 LINC01587Q99440 93 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 TMEM106BQ9NUM4 274 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 IGKV1D-33P01593 117 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 IGKV1-33P01594 117 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 IGKV1D-42A0A075B6H8 117 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 CTSBP07858 339 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 DMRTA1Q5VZB9 504 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 UNQ9370/PRO34162Q6UXP9 181 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 SPCS1Q9Y6A9 102 aa13.61□□□□□ -0.23
RXRA-201ENST00000356384 A0A1B0GUT8 65 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 CA1P00915 261 aaPredicted RBP13.6□□□□□ -0.23
RXRA-201ENST00000356384 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
RXRA-201ENST00000356384 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 WDYHV1Q96HA8 205 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 TRAV12-3A0A0B4J271 114 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 C4orf51C9J302 202 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 OR5A1Q8NGJ0 315 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 TRGV2A0A075B6R0 118 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 EPOPA6NHQ4 379 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 SAA1P0DJI8 122 aaPredicted RBP13.6□□□□□ -0.23
RXRA-201ENST00000356384 ATP5IP56385 69 aaPredicted RBP13.6□□□□□ -0.23
RXRA-201ENST00000356384 TMEM54Q969K7 222 aa13.6□□□□□ -0.23
RXRA-201ENST00000356384 FHL5Q5TD97 284 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 A0A1W2PRX2 142 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 CLEC19AQ6UXS0 136 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 NIT1Q86X76 327 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 FAM19A2Q8N3H0 131 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 SPTA1P02549 2419 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 FAM201AQ5SY85 155 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 FAM71F2Q6NXP2 309 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 SAP25Q8TEE9 199 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 RPP21Q9H633 154 aaKnown RBP13.59□□□□□ -0.23
RXRA-201ENST00000356384 SCN4AP35499 1836 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 IFITM2Q01629 132 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 PPP1R27Q86WC6 154 aa13.59□□□□□ -0.23
RXRA-201ENST00000356384 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.23
RXRA-201ENST00000356384 LINC00614P0C842 121 aa13.58□□□□□ -0.23
RXRA-201ENST00000356384 APOBEC3AP31941 199 aaPredicted RBP13.58□□□□□ -0.23
RXRA-201ENST00000356384 PCOLCEQ15113 449 aa13.58□□□□□ -0.23
RXRA-201ENST00000356384 LRTM2Q8N967 370 aa13.58□□□□□ -0.23
RXRA-201ENST00000356384 OR52E5Q8NH55 327 aa13.58□□□□□ -0.23
RXRA-201ENST00000356384 C21orf62Q9NYP8 219 aa13.58□□□□□ -0.23
RXRA-201ENST00000356384 SIPA1L1O43166 1804 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 C12orf77C9JDV5 145 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 PROB1E7EW31 1015 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 SP9P0CG40 484 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 ACP7Q6ZNF0 438 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 LOXL4Q96JB6 756 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 DPM3Q9P2X0 92 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 ATP5G3P48201 142 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 SPOCK3Q9BQ16 436 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 C11orf68Q9H3H3 251 aaKnown RBP13.58□□□□□ -0.24
RXRA-201ENST00000356384 SFTA2Q6UW10 78 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 TMEM50AO95807 157 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 FER1L6-AS1Q8NA97 138 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 OSR1Q8TAX0 266 aaPredicted RBP13.58□□□□□ -0.24
RXRA-201ENST00000356384 FMC1Q96HJ9 113 aa13.58□□□□□ -0.24
RXRA-201ENST00000356384 SVILO95425 2214 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.57□□□□□ -0.24
RXRA-201ENST00000356384 MALP21145 153 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 LINC01590Q5TEZ4 76 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 CACNA1GO43497 2377 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 C17orf98A8MV24 154 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 SDF2L1Q9HCN8 221 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 ELOVL5Q9NYP7 299 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 A0A0G2JLM5 398 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 IGHMP01871 453 aa13.57□□□□□ -0.24
RXRA-201ENST00000356384 IGHV4-39P01824 125 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 LEPP41159 167 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 C1QL2Q7Z5L3 287 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 FAM216BQ8N7L0 139 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 PILRBQ9UKJ0 227 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 IGHV3-11P01762 117 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 FAM27E3Q08E93 113 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 Q6ZT83 130 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 ARPC1AQ92747 370 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 TRAV8-2A0A0B4J237 113 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 LOC390937A0A1W2PQ73 354 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 GATA2P23769 480 aaPredicted RBP13.56□□□□□ -0.24
RXRA-201ENST00000356384 EFNB1P98172 346 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 GFI1BQ5VTD9 330 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 MIR17HGQ75NE6 70 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 FBLIM1Q8WUP2 373 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 DERL1Q9BUN8 251 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms