RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TAS2R60P59551 318 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 RBPMS2Q6ZRY4 209 aaKnown RBP10.34□□□□□ -0.75
COLCA1-201ENST00000355430 OR9G1Q8NH87 305 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 GSX1Q9H4S2 264 aaPredicted RBP10.34□□□□□ -0.75
COLCA1-201ENST00000355430 IGHV3OR16-10A0A075B7F0 116 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 A0A1B0GW64 132 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 WIPF3A6NGB9 483 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 IMMP2LQ96T52 175 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 COL5A1-AS1Q5SY13 56 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 RNF166Q96A37 237 aaPredicted RBP10.34□□□□□ -0.75
COLCA1-201ENST00000355430 MT-ND6P03923 174 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 SOD3P08294 240 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 HIST1H1EP10412 219 aaKnown RBP10.33□□□□□ -0.76
COLCA1-201ENST00000355430 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
COLCA1-201ENST00000355430 C1QL4Q86Z23 238 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 MMD2Q8IY49 270 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 ATG101Q9BSB4 218 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 SCO2A0A1W2PP80 73 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 C17orf100A8MU93 164 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 SLC17A3O00476 420 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 RAMP3O60896 148 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 PLAUP00749 431 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 CELA3BP08861 270 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 HGFACQ04756 655 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 OR4C13Q8NGP0 309 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 SPSB4Q96A44 273 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 ASCL3Q9NQ33 180 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 GOLT1BQ9Y3E0 138 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 PINLYPA6NC86 204 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 OR5AL1P0C617 328 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 HSPE1P61604 102 aaKnown RBP10.33□□□□□ -0.76
COLCA1-201ENST00000355430 SRSF6Q13247 344 aaKnown RBP10.33□□□□□ -0.76
COLCA1-201ENST00000355430 ISLRO14498 428 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 IL6RP08887 468 aaPredicted RBP10.33□□□□□ -0.76
COLCA1-201ENST00000355430 FCER1GP30273 86 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 TMEM191AQ9H0A3 160 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 JPT1Q9UK76 154 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 SDK2Q58EX2 2172 aa10.33□□□□□ -0.76
COLCA1-201ENST00000355430 AMY1AP04745 511 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 COL8A1P27658 744 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 ACP7Q6ZNF0 438 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 OR13A1Q8NGR1 328 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 C1orf147Q96MC9 270 aaPredicted RBP10.32□□□□□ -0.76
COLCA1-201ENST00000355430 PHF3Q92576 2039 aaKnown RBP10.32□□□□□ -0.76
COLCA1-201ENST00000355430 CEACAM18A8MTB9 384 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 LINC00869P0C866 280 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 SRIP30626 198 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 PNKDQ8N490 385 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 RABAC1Q9UI14 185 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 TFF1P04155 84 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 UNQ5815/PRO19632Q6UWF5 114 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 MDS2Q8NDY4 140 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 OR4B1Q8NGF8 309 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 ANAPC10Q9UM13 185 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 FAM186AA6NE01 2351 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 GGNQ86UU5 652 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 HIST1H2BLQ99880 126 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
COLCA1-201ENST00000355430 CD99P14209 185 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 HINT1P49773 126 aaPredicted RBP10.31□□□□□ -0.76
COLCA1-201ENST00000355430 FOXG1P55316 489 aaPredicted RBP10.31□□□□□ -0.76
COLCA1-201ENST00000355430 CENPWQ5EE01 88 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 NMSQ5H8A3 153 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 C11orf42Q8N5U0 333 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 OR4X2Q8NGF9 303 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 C10orf91Q5T1B1 145 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 ZNF497Q6ZNH5 498 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 TMEM170AQ8WVE7 144 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 YTHDF2Q9Y5A9 579 aaKnown RBP10.31□□□□□ -0.76
COLCA1-201ENST00000355430 RRHO14718 337 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 CA2P00918 260 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 RPL27AP46776 148 aaKnown RBP10.31□□□□□ -0.76
COLCA1-201ENST00000355430 TCF23Q7RTU1 214 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 MBD3L1Q8WWY6 194 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 NABP2Q9BQ15 211 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 TICRRQ7Z2Z1 1910 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 HLA-DQA1P01909 254 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 LRRK1Q38SD2 2015 aa10.31□□□□□ -0.76
COLCA1-201ENST00000355430 EFNA4P52798 201 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 ZNRF1Q8ND25 227 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 TMEM186Q96B77 213 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 TEX50A0A1B0GTY4 177 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 A0A1W2PS18 150 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 FAM106AQ4KMX7 169 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 CGAP01215 116 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 PSG7Q13046 419 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 ATOH7Q8N100 152 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 PYY3Q5JQD4 70 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 OR51G1Q8NGK1 321 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 IL36BQ9NZH7 164 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 ALPK3Q96L96 1907 aa10.3□□□□□ -0.76
COLCA1-201ENST00000355430 SIAH2O43255 324 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 PRNTQ86SH4 94 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 PLSCR4Q9NRQ2 329 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 IGHV3-72A0A0B4J1Y9 119 aa10.29□□□□□ -0.76
COLCA1-201ENST00000355430 Q0VFX4 171 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms