RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 REPIN1Q9BWE0 567 aaKnown RBP11.13□□□□□ -0.63
SCN8A-202ENST00000355133 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
SCN8A-202ENST00000355133 A0A0G2JK05 382 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 SOD3P08294 240 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 ASIPP42127 132 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-202ENST00000355133 DMRTA2Q96SC8 542 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 NPIPB7O75200 414 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 HLA-DRB1P01911 266 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 HBBP68871 147 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 LY6DQ14210 128 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-202ENST00000355133 RPRMQ9NS64 109 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 IQCF6A8MYZ5 107 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-202ENST00000355133 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-202ENST00000355133 LYNX1G3V0Z9 82 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 LYNX1P0DP58 116 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 CBLN1P23435 193 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
SCN8A-202ENST00000355133 SLC25A34Q6PIV7 304 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 COLCA1Q6ZS62 124 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 PSMG3Q9BT73 122 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-202ENST00000355133 WNT10AQ9GZT5 417 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 TMEM160Q9NX00 188 aa11.12□□□□□ -0.63
SCN8A-202ENST00000355133 MSGN1A6NI15 193 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 ERVH48-1M5A8F1 160 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 PLPPR1Q8TBJ4 325 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 HIST1H2BAQ96A08 127 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 RCC1LQ96I51 464 aaKnown RBP11.11□□□□□ -0.63
SCN8A-202ENST00000355133 C18orf15Q96N68 181 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 CD24P25063 80 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 RNASE6Q93091 150 aaKnown RBP11.11□□□□□ -0.63
SCN8A-202ENST00000355133 CCDC88CQ9P219 2028 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 MEF2CQ06413 473 aaPredicted RBP11.11□□□□□ -0.63
SCN8A-202ENST00000355133 TMEM70Q9BUB7 260 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 SCN2AQ99250 2005 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 SPTA1P02549 2419 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 ZNF98A6NK75 572 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 CA7P43166 264 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 TMEM170BQ5T4T1 132 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 ZIC4Q8N9L1 334 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 LINC01587Q99440 93 aa11.11□□□□□ -0.63
SCN8A-202ENST00000355133 SLC17A3O00476 420 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 COTL1Q14019 142 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 DEPPQ9NTK1 212 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 ZP1P60852 638 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 OR52E5Q8NH55 327 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 RTBDNQ9BSG5 229 aaPredicted RBP11.1□□□□□ -0.63
SCN8A-202ENST00000355133 C12orf54Q6X4T0 127 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 LINC00114Q6XXX2 140 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 SEMA5BQ9P283 1151 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 MRAP2Q96G30 205 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 UQCR10Q9UDW1 63 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 PARP14Q460N5 1801 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 PQLC2LA1A4F0 135 aa11.1□□□□□ -0.63
SCN8A-202ENST00000355133 SAA2-SAA4A0A096LPE2 208 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 SAA2P0DJI9 122 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-202ENST00000355133 NHLRC3Q5JS37 347 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 MIR17HGQ75NE6 70 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 COPS9Q8WXC6 57 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 PIKFYVEQ9Y2I7 2098 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 CXorf65A6NEN9 183 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 PEX7O00628 323 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 SAA1P0DJI8 122 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-202ENST00000355133 GPX4P36969 197 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-202ENST00000355133 MESP1Q9BRJ9 268 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 MRPS18CQ9Y3D5 142 aaKnown RBP11.09□□□□□ -0.63
SCN8A-202ENST00000355133 MYOFQ9NZM1 2061 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 A0A1B0GTI1 187 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 PINLYPA6NC86 204 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 ZNF418Q8TF45 676 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-202ENST00000355133 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 TRBV9A0A0B4J1U6 114 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 WBP1Q96G27 269 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 CBLN4Q9NTU7 201 aa11.09□□□□□ -0.63
SCN8A-202ENST00000355133 ZNF646O15015 1829 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-202ENST00000355133 MPTX1A8MV57 137 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 CD8AP01732 235 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 UCP1P25874 307 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 ZNF506Q5JVG8 444 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 SPRR3Q9UBC9 169 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.08□□□□□ -0.64
SCN8A-202ENST00000355133 PLP1P60201 277 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 JOSD1Q15040 202 aaPredicted RBP11.08□□□□□ -0.64
SCN8A-202ENST00000355133 ERASQ7Z444 233 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 KCNS1Q96KK3 526 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 TRAV8-6A0A0B4J262 113 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 H7C1H1 209 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 VDAC2P45880 294 aaPredicted RBP11.08□□□□□ -0.64
SCN8A-202ENST00000355133 ATP5G3P48201 142 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 REC114Q7Z4M0 266 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms