RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CGAP01215 116 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 TNFRSF9Q07011 255 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 LHFPL6Q9Y693 200 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 BCL2P10415 239 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 PRSS53Q2L4Q9 553 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 LURAP1LQ8IV03 231 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 MRAPQ8TCY5 172 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 TAF15Q92804 592 aaKnown RBP eCLIP8.47□□□□□ -1.05
COL11A1-201ENST00000353414 TRAV8-2A0A0B4J237 113 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 RAMP1O60894 148 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 TFF3Q07654 80 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 KLRD1Q13241 179 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 CLDND2Q8NHS1 167 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 HMGCLL1Q8TB92 370 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 NPIPB4C9JG80 1138 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 IGFBP2P18065 325 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 GNLYP22749 145 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 CENPWQ5EE01 88 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.05
COL11A1-201ENST00000353414 JMJD8Q96S16 334 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 NABP2Q9BQ15 211 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 TRAV30A0A087WSZ9 112 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 LINC00862A6NCI5 91 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 CYP2G1PQ6ZSU1 146 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 SPSB2Q99619 263 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 MARVELD1Q9BSK0 173 aa8.46□□□□□ -1.05
COL11A1-201ENST00000353414 ZNF703Q9H7S9 590 aaPredicted RBP8.46□□□□□ -1.05
COL11A1-201ENST00000353414 ZNF79Q15937 498 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 UBE2E2Q96LR5 201 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 SDF2L1Q9HCN8 221 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 HMSDA8MTL9 139 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 VENTXO95231 258 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 PMCHL1Q16048 86 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 SLC25A34Q6PIV7 304 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM91Q6ZNR0 172 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 C1orf122Q6ZSJ8 110 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 MRPL20Q9BYC9 149 aaKnown RBP8.46□□□□□ -1.06
COL11A1-201ENST00000353414 ASAH2BP0C7U1 165 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 C8orf88P0DMB2 117 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 CBLN1P23435 193 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 DNM1P46Q6ZS02 220 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 IMMP2LQ96T52 175 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 DERL1Q9BUN8 251 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
COL11A1-201ENST00000353414 INTS1Q8N201 2190 aaKnown RBP8.46□□□□□ -1.06
COL11A1-201ENST00000353414 CECR9P0C854 216 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 LRTM2Q8N967 370 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 CACNA1IQ9P0X4 2223 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 C12orf54Q6X4T0 127 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 RTN4RL2Q86UN3 420 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 OR10AG1Q8NH19 301 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 UQCR10Q9UDW1 63 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 ALPK2Q86TB3 2170 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 IGKV1D-42A0A075B6H8 117 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 EFEMP2O95967 443 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 CFHR3Q02985 330 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.45□□□□□ -1.06
COL11A1-201ENST00000353414 C3orf56Q8N813 242 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 PMCHL2Q9BQD1 86 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 SLC25A20O43772 301 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 CSRP2Q16527 193 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 C9orf62Q8N4C0 152 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM167AQ8TBQ9 72 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 HLA-DRB1P01911 266 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 HSPE1P61604 102 aaKnown RBP8.45□□□□□ -1.06
COL11A1-201ENST00000353414 OR13A1Q8NGR1 328 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 CHCHD5Q9BSY4 110 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 FNDC4Q9H6D8 234 aaPredicted RBP8.45□□□□□ -1.06
COL11A1-201ENST00000353414 TCF19Q9Y242 345 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 MYO7BQ6PIF6 2116 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 FOLR2P14207 255 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 CXCL2P19875 107 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 CD300LDQ6UXZ3 194 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 BRD3OSQ6XYD6 125 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM105Q8N8V8 129 aa8.45□□□□□ -1.06
COL11A1-201ENST00000353414 C4orf51C9J302 202 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 PRSS23O95084 383 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 TNFSF10P50591 281 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 FAM209AQ5JX71 171 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 SLC25A47Q6Q0C1 308 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 TCF24Q7RTU0 167 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM252Q8N6L7 170 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 KIAA2026Q5HYC2 2103 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 PATJQ8NI35 1801 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 SCO2A0A1W2PP80 73 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 PTP4A3O75365 173 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 DOCK8Q8NF50 2099 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
COL11A1-201ENST00000353414 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
COL11A1-201ENST00000353414 NDUFA2O43678 99 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 APOHP02749 345 aaPredicted RBP8.44□□□□□ -1.06
COL11A1-201ENST00000353414 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
COL11A1-201ENST00000353414 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
COL11A1-201ENST00000353414 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 IGHV1-2P23083 117 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 OR10J3Q5JRS4 329 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 C1QTNF12Q5T7M4 302 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 WDFY2Q96P53 400 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 PSMG3Q9BT73 122 aaPredicted RBP8.44□□□□□ -1.06
COL11A1-201ENST00000353414 CGB3P0DN86 165 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms