RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 OR1N2Q8NGR9 330 aa13.46□□□□□ -0.25
PTPN11-201ENST00000351677 CLDND2Q8NHS1 167 aa13.46□□□□□ -0.25
PTPN11-201ENST00000351677 OSR1Q8TAX0 266 aaPredicted RBP13.46□□□□□ -0.25
PTPN11-201ENST00000351677 GGACTQ9BVM4 153 aa13.46□□□□□ -0.25
PTPN11-201ENST00000351677 H3BVH4 76 aa13.46□□□□□ -0.26
PTPN11-201ENST00000351677 FAM89BQ8N5H3 189 aa13.46□□□□□ -0.26
PTPN11-201ENST00000351677 HEATR5BQ9P2D3 2071 aa13.46□□□□□ -0.26
PTPN11-201ENST00000351677 TRPM7Q96QT4 1865 aa13.46□□□□□ -0.26
PTPN11-201ENST00000351677 FREM3P0C091 2139 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 TRAV24A0A0B4J272 114 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 ZIC4Q8N9L1 334 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 ATG101Q9BSB4 218 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 GVINP1Q7Z2Y8 2422 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 TM4SF5O14894 197 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 ICAM4Q14773 271 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 FAM57AQ8TBR7 257 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 RAMP3O60896 148 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 FOXG1P55316 489 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-201ENST00000351677 SOD3P08294 240 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 MBNL2Q5VZF2 373 aaKnown RBP13.45□□□□□ -0.26
PTPN11-201ENST00000351677 SPRR3Q9UBC9 169 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 PHLDA3Q9Y5J5 127 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 IGHV3-66A0A0C4DH42 116 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 FBLL1A6NHQ2 334 aaKnown RBP13.45□□□□□ -0.26
PTPN11-201ENST00000351677 VENTXO95231 258 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 PMCHL1Q16048 86 aa13.45□□□□□ -0.26
PTPN11-201ENST00000351677 RLFQ13129 1914 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 IGHV3OR16-12A0A075B7B8 117 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 IGHV3-49A0A0A0MS15 119 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 CLPSP04118 112 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 CD55P08174 381 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 KLRB1Q12918 225 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 MAP1LC3AQ9H492 121 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 MED12Q93074 2177 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 CCL3L1P16619 93 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 SBF1O95248 1867 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 NUDT3O95989 172 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 LCN2P80188 198 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 MIR17HGQ75NE6 70 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.44□□□□□ -0.26
PTPN11-201ENST00000351677 IMMP2LQ96T52 175 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 CBLN4Q9NTU7 201 aa13.44□□□□□ -0.26
PTPN11-201ENST00000351677 IGKV1-12A0A0C4DH73 117 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 FOXI3A8MTJ6 420 aaPredicted RBP13.43□□□□□ -0.26
PTPN11-201ENST00000351677 RBFOX2O43251 390 aaKnown RBP eCLIP13.43□□□□□ -0.263e-6■■■■□ 22.3
PTPN11-201ENST00000351677 IGKV1D-12P01611 117 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 ZCCHC24Q8N2G6 241 aaKnown RBP13.43□□□□□ -0.26
PTPN11-201ENST00000351677 NBEAP1P0C6P0 100 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 FOXA3P55318 350 aaPredicted RBP13.43□□□□□ -0.26
PTPN11-201ENST00000351677 ATP5IP56385 69 aaPredicted RBP13.43□□□□□ -0.26
PTPN11-201ENST00000351677 WDR82Q6UXN9 313 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 ZNF497Q6ZNH5 498 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 VWA8A3KMH1 1905 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 IGKV1D-33P01593 117 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 IGKV1-33P01594 117 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 FOXA2Q9Y261 457 aaPredicted RBP13.43□□□□□ -0.26
PTPN11-201ENST00000351677 FOLR2P14207 255 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 NPPCP23582 126 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 KLK15Q9H2R5 256 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 SAA2-SAA4A0A096LPE2 208 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 SAA2P0DJI9 122 aaPredicted RBP13.43□□□□□ -0.26
PTPN11-201ENST00000351677 CEP250Q9BV73 2442 aa13.43□□□□□ -0.26
PTPN11-201ENST00000351677 CRYGSP22914 178 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 TMEM183AQ8IXX5 376 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 UQCR10Q9UDW1 63 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 RPS20P60866 119 aaKnown RBP13.42□□□□□ -0.26
PTPN11-201ENST00000351677 EEF1AKMT3Q96AZ1 226 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 TRBV9A0A0B4J1U6 114 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 FOXD3Q9UJU5 478 aaPredicted RBP13.42□□□□□ -0.26
PTPN11-201ENST00000351677 TP53BP1Q12888 1972 aaPredicted RBP13.42□□□□□ -0.26
PTPN11-201ENST00000351677 C17orf100A8MU93 164 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 NTN3O00634 580 aaPredicted RBP13.42□□□□□ -0.26
PTPN11-201ENST00000351677 ZNF207O43670 478 aaKnown RBP13.42□□□□□ -0.26
PTPN11-201ENST00000351677 GPX1P07203 203 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 IGHV3OR16-8A0A075B7F1 116 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 PDLIM4P50479 330 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 FAM53AQ6NSI3 398 aaPredicted RBP13.42□□□□□ -0.26
PTPN11-201ENST00000351677 DPM3Q9P2X0 92 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 ZSWIM8A7E2V4 1837 aa13.42□□□□□ -0.26
PTPN11-201ENST00000351677 FAM106AQ4KMX7 169 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 SYT8Q8NBV8 401 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 NABP1Q96AH0 204 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 GGNQ86UU5 652 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 CCL19Q99731 98 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 WFDC1Q9HC57 220 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 ESPL1Q14674 2120 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 CEACAM1P13688 526 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 CA7P43166 264 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 HBBP68871 147 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 IL36BQ9NZH7 164 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 C5orf63A6NC05 138 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 ZNF324O75467 553 aaPredicted RBP13.41□□□□□ -0.26
PTPN11-201ENST00000351677 GCSHP23434 173 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
PTPN11-201ENST00000351677 SDF2L1Q9HCN8 221 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 IGKV3-20P01619 116 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 SAA1P0DJI8 122 aaPredicted RBP13.41□□□□□ -0.26
PTPN11-201ENST00000351677 PET117Q6UWS5 81 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 LINC00312Q9Y6C7 94 aa13.41□□□□□ -0.26
PTPN11-201ENST00000351677 F8VVB4 439 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms