RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CHODLQ9H9P2 273 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 TECTAO75443 2155 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 SDK2Q58EX2 2172 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 TRAV30A0A087WSZ9 112 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 SLC25A17O43808 307 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 GOSR1O95249 250 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 IGLV1-44P01699 117 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 FAM216BQ8N7L0 139 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 PRSS3P2Q8NHM4 247 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 PCGF1Q9BSM1 259 aa10.18□□□□□ -0.78
SMAD9-201ENST00000350148 QTRT1Q9BXR0 403 aaKnown RBP10.18□□□□□ -0.78
SMAD9-201ENST00000350148 HIST1H2BAQ96A08 127 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 IL36RNQ9UBH0 155 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 TNFSF13O75888 250 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 ATP5J2P56134 94 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 HGFACQ04756 655 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 ZNF880Q6PDB4 577 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 MAS1LP35410 378 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 Q6P435 159 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 DPM3Q9P2X0 92 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 ALPK2Q86TB3 2170 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 MORN2Q502X0 79 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 C10orf113Q5VZT2 155 aa10.17□□□□□ -0.78
SMAD9-201ENST00000350148 ITGB1BP1O14713 200 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 TSPAN13O95857 204 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 THBDP07204 575 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 SRP14P37108 136 aaKnown RBP10.16□□□□□ -0.78
SMAD9-201ENST00000350148 DSCR9P59020 149 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 FBLN7Q53RD9 439 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 C20orf204Q6ZNR8 217 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 CEACAM18A8MTB9 384 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 REG1BP48304 166 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 SLC25A34Q6PIV7 304 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 HEATR5AQ86XA9 2040 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 C5orf63A6NC05 138 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 OR2J3O76001 311 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 GATA4P43694 442 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 ZNF48Q96MX3 618 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-201ENST00000350148 ZNF785A8K8V0 405 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 SRSF4Q08170 494 aaKnown RBP10.16□□□□□ -0.78
SMAD9-201ENST00000350148 KRTAP27-1Q3LI81 207 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 OR8I2Q8N0Y5 310 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 SFRP2Q96HF1 295 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 P2RX4Q99571 388 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 UBE2L3P68036 154 aaKnown RBP10.16□□□□□ -0.78
SMAD9-201ENST00000350148 Q8TCH9 128 aa10.16□□□□□ -0.78
SMAD9-201ENST00000350148 NUDT3O95989 172 aa10.15□□□□□ -0.78
SMAD9-201ENST00000350148 TRAV14DV4A0A0A6YYC5 116 aa10.15□□□□□ -0.78
SMAD9-201ENST00000350148 SPAG8Q99932 426 aaPredicted RBP10.15□□□□□ -0.78
SMAD9-201ENST00000350148 DANCRP0C864 163 aa10.15□□□□□ -0.78
SMAD9-201ENST00000350148 HIST1H1BP16401 226 aaKnown RBP10.15□□□□□ -0.78
SMAD9-201ENST00000350148 ZNF506Q5JVG8 444 aa10.15□□□□□ -0.78
SMAD9-201ENST00000350148 SCGB1D4Q6XE38 83 aa10.15□□□□□ -0.78
SMAD9-201ENST00000350148 ARID1AO14497 2285 aa10.15□□□□□ -0.79
SMAD9-201ENST00000350148 MYPOPQ86VE0 399 aaPredicted RBP10.15□□□□□ -0.79
SMAD9-201ENST00000350148 OR4X1Q8NH49 305 aa10.15□□□□□ -0.79
SMAD9-201ENST00000350148 WDR61Q9GZS3 305 aaKnown RBP10.15□□□□□ -0.79
SMAD9-201ENST00000350148 PXMP4Q9Y6I8 212 aa10.15□□□□□ -0.79
SMAD9-201ENST00000350148 TMEM178BH3BS89 294 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 CA1P00915 261 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-201ENST00000350148 HSPB1P04792 205 aaKnown RBP10.14□□□□□ -0.79
SMAD9-201ENST00000350148 SLC25A5P05141 298 aaKnown RBP10.14□□□□□ -0.79
SMAD9-201ENST00000350148 LMO1P25800 156 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 GNG4P50150 75 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 SRSF9Q13242 221 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMAD9-201ENST00000350148 LY6G6FQ5SQ64 297 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 PNKDQ8N490 385 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 LYZP61626 148 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 PCNTO95613 3336 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 A0A1W2PRD5 423 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 A0A1W2PRF3 423 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 A0A1W2PRM7 423 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 C11orf94C9JXX5 98 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 RPL11P62913 178 aaKnown RBP10.14□□□□□ -0.79
SMAD9-201ENST00000350148 OR5R1Q8NH85 324 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 OR13C6PQ8NH95 151 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 BCL2P10415 239 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 FAM71F2Q6NXP2 309 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 PQLC2Q6ZP29 291 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 TMEM136Q6ZRR5 245 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 CITED2Q99967 270 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-201ENST00000350148 MRPL32Q9BYC8 188 aaKnown RBP10.14□□□□□ -0.79
SMAD9-201ENST00000350148 TMEM133Q9H2Q1 129 aa10.14□□□□□ -0.79
SMAD9-201ENST00000350148 RPUSD1Q9UJJ7 312 aaKnown RBP10.14□□□□□ -0.79
SMAD9-201ENST00000350148 ZG16O60844 167 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 HYPMO75409 117 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 CFHR2P36980 270 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 RSPO1Q2MKA7 263 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-201ENST00000350148 OR1B1Q8NGR6 318 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 C1orf147Q96MC9 270 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-201ENST00000350148 IGKV1D-13A0A0B4J2D9 117 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 A0A1W2PNU3 283 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-201ENST00000350148 C17orf98A8MV24 154 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 IGKV1-13P0DP09 117 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 NCOR1O75376 2440 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 IGKV1D-8A0A087WSZ0 117 aa10.13□□□□□ -0.79
SMAD9-201ENST00000350148 MLNRO43193 412 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms