RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 REG1BP48304 166 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 EFNA4P52798 201 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 RPS16P62249 146 aaKnown RBP5.59□□□□□ -1.51
TRIM55-203ENST00000350034 RAB11AP62491 216 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 BTN1A1Q13410 526 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM249Q2WGJ8 235 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 C2orf83Q53S99 150 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 HCP5Q6MZN7 132 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 C1orf122Q6ZSJ8 110 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 SSX7Q7RTT5 188 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 RPP25LQ8N5L8 163 aaKnown RBP5.59□□□□□ -1.51
TRIM55-203ENST00000350034 OR11H6Q8NGC7 330 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 OR4P4Q8NGL7 312 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 OR10G4Q8NGN3 311 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 OR1L8Q8NGR8 309 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 CLDND2Q8NHS1 167 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 VSTM2AQ8TAG5 236 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 SUN5Q8TC36 379 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 SFT2D1Q8WV19 159 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 NPCDR1Q9BY65 106 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 NKX6-2Q9C056 277 aaPredicted RBP5.59□□□□□ -1.51
TRIM55-203ENST00000350034 SLC35B3Q9H1N7 401 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 PLEKHA3Q9HB20 300 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 NDUFA4L2Q9NRX3 87 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 LSM4Q9Y4Z0 139 aaKnown RBP5.59□□□□□ -1.51
TRIM55-203ENST00000350034 ROS1P08922 2347 aa5.59□□□□□ -1.51
TRIM55-203ENST00000350034 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.52
TRIM55-203ENST00000350034 PKDREJQ9NTG1 2253 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 LOC105371242A0A075B767 164 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 IGHV1-3A0A0C4DH29 117 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 LOC102723971A0A1B0GUV8 181 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 FAM74A7A6NL05 159 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 ODF3BA8MYP8 253 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 SEC14L6B5MCN3 397 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 C17orf112F2Z3M2 114 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 H7C2Y5 167 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 NDUFS6O75380 124 aaKnown RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 SNAPINO95295 136 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 HSPB1P04792 205 aaKnown RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 RNASE2P10153 161 aaKnown RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 PRTN3P24158 256 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 OPRK1P41145 380 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 GPR6P46095 362 aaPredicted RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 NPBWR1P48145 328 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 PPT1P50897 306 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 RAB2AP61019 212 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 RPL8P62917 257 aaKnown RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 PAX2Q02962 417 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 ICAM4Q14773 271 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 FAM74A3Q4VXF1 159 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 KHDC3LQ587J8 217 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 ARSJQ5FYB0 599 aaPredicted RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 LDLRAD2Q5SZI1 272 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 ZNF787Q6DD87 383 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 PVRIGQ6DKI7 326 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 TREML4Q6UXN2 200 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 KIR3DL3Q8N743 410 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 TEX45Q8NA69 505 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 CLRN3Q8NCR9 226 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 MGST2Q99735 147 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 RNF5Q99942 180 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 RARRES2Q99969 163 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 SSBP3Q9BWW4 388 aaPredicted RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 EIF5A2Q9GZV4 153 aaKnown RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 UNKLQ9H9P5 680 aaKnown RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 ENY2Q9NPA8 101 aa5.58□□□□□ -1.52
TRIM55-203ENST00000350034 AMMECR1Q9Y4X0 333 aaPredicted RBP5.58□□□□□ -1.52
TRIM55-203ENST00000350034 CTXND1A0A1B0GTU2 59 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 A0A1B0GV50 99 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 A0A1W2PN81 502 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 A0A1W2PPI3 338 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 E7EUB6 86 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 NDUFS7O75251 213 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 YIF1AO95070 293 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 IGHV2-5P01817 119 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 IFNA4P05014 189 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 BCL2P10415 239 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 COX7A1P24310 79 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 CHRNA7P36544 502 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 CDKN1AP38936 164 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 ELLP55199 621 aaPredicted RBP5.57□□□□□ -1.52
TRIM55-203ENST00000350034 DLX1P56177 255 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 HABP2Q14520 560 aaPredicted RBP5.57□□□□□ -1.52
TRIM55-203ENST00000350034 ACOT6Q3I5F7 207 aaPredicted RBP5.57□□□□□ -1.52
TRIM55-203ENST00000350034 VMA21Q3ZAQ7 101 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 FFAR4Q5NUL3 377 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 TPTE2P1Q5T6R2 138 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 LCN15Q6UWW0 184 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 PNKDQ8N490 385 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 ZNF709Q8N972 641 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 OR10G9Q8NGN4 311 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 OR10G7Q8NGN6 311 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 RITA1Q96K30 269 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 GGTLC1Q9BX51 225 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 ACTR3CQ9C0K3 210 aaPredicted RBP5.57□□□□□ -1.52
TRIM55-203ENST00000350034 COMMD5Q9GZQ3 224 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 MAP1LC3BQ9GZQ8 125 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 ZNF430Q9H8G1 570 aaPredicted RBP5.57□□□□□ -1.52
TRIM55-203ENST00000350034 UBTD1Q9HAC8 227 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms