RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 PLAUP00749 431 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 IGKV1D-33P01593 117 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 IGKV1-33P01594 117 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 HLA-DQA1P01909 254 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 LINC00869P0C866 280 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 IAPPP10997 89 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 IL11P20809 199 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 NPPCP23582 126 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 ACP1P24666 158 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 CD1BP29016 333 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 IER3P46695 156 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 RBM11P57052 281 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 TGFBR3Q03167 851 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 SRSF1Q07955 248 aaKnown RBP eCLIP6.36□□□□□ -1.392e-8■□□□□ 10.6
UBE2D3-204ENST00000349311 DEFB110Q30KQ9 67 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 SAMD13Q5VXD3 122 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 ZNF324BQ6AW86 544 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 GUSBP11Q6P575 273 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 C16orf54Q6UWD8 224 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 PRSS57Q6UWY2 283 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 TMEM14EPQ6UXP3 125 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 DEFB125Q8N687 156 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 SCCPDHQ8NBX0 429 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 APOBEC3DQ96AK3 386 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 OR6C1Q96RD1 312 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 PMCHL2Q9BQD1 86 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 SF3B5Q9BWJ5 86 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 CCL28Q9NRJ3 127 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 C1RLQ9NZP8 487 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 CACNG5Q9UF02 275 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 ZNF391Q9UJN7 358 aa6.36□□□□□ -1.39
UBE2D3-204ENST00000349311 ALPK2Q86TB3 2170 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 DOCK10Q96BY6 2186 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 PTPRBP23467 1997 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 EML6Q6ZMW3 1958 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 KIAA1549Q9HCM3 1950 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 IGLV3-12A0A075B6K2 115 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 IGKV3D-11A0A0A0MRZ8 115 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 IGHV5-10-1A0A0J9YXX1 117 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 A0A1B0GV72 72 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 A0A1B0GX78 115 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 G3V4G9 280 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 H0YJW9 148 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 RER1O15258 196 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 RBFOX2O43251 390 aaKnown RBP eCLIP6.35□□□□□ -1.391e-7■□□□□ 10
UBE2D3-204ENST00000349311 SPRY1O43609 319 aaPredicted RBP6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 ANGPTL7O43827 346 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 ACTL6BO94805 426 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 NDUFB4O95168 129 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 NAPSAO96009 420 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 MT-CO2P00403 227 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 OR10J4P0C629 311 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 OTX1P32242 354 aaPredicted RBP6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 CEACAM3P40198 252 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 REG1BP48304 166 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 FUT6P51993 359 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 UBE2G1P62253 170 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 MFAP5Q13361 173 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 SPANXN5Q5MJ07 72 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 PHYHD1Q5SRE7 291 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 RHBDD2Q6NTF9 364 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 MRPL54Q6P161 138 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 Q6ZVH6 145 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 SAXO1Q8IYX7 474 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 Q8NFD4 153 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 OR4F17Q8NGA8 305 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 OR10G3Q8NGC4 313 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 OR1L3Q8NH93 324 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 SLC25A40Q8TBP6 338 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 GATAD1Q8WUU5 269 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 OXGR1Q96P68 337 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 EMC6Q9BV81 110 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 RTN4RQ9BZR6 473 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 FGF21Q9NSA1 209 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 LIN7CQ9NUP9 197 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 COPS7AQ9UBW8 275 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 NAT8BQ9UHF3 227 aa6.35□□□□□ -1.39
UBE2D3-204ENST00000349311 F2Z2F3 143 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 M0R135 149 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 HLA-DRB1P01911 266 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 IGKV3-11P04433 115 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 IGLC1P0CG04 106 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 SMIM17P0DL12 118 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 NPY1RP25929 384 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 S100A7P31151 101 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 ZNF83P51522 516 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 MLF1P58340 268 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 SELENOVP59797 346 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 CCL7P80098 99 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 C17orf67Q0P5P2 114 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 IL11RAQ14626 422 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 TRIP6Q15654 476 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 VWC2Q2TAL6 325 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 PIGYQ3MUY2 71 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 KRTCAP3Q53RY4 240 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 BVES-AS1Q5T3Y7 98 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 AMMECR1LQ6DCA0 310 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 FOXL2NBQ6ZUU3 175 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 PIP4P1Q86T03 277 aa6.34□□□□□ -1.39
UBE2D3-204ENST00000349311 MMD2Q8IY49 270 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms