RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SMDT1Q9H4I9 107 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 POLQO75417 2590 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 VSTM5A8MXK1 200 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 ZNF726P1Q15940 193 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 MOB3BQ86TA1 216 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 OR10G4Q8NGN3 311 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 OR10G9Q8NGN4 311 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 JPT1Q9UK76 154 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 HIPK2Q9H2X6 1198 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 RAI1Q7Z5J4 1906 aaPredicted RBP11.42□□□□□ -0.58
TRIM4-201ENST00000349062 MLANAQ16655 118 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 STUMQ69YW2 141 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 OR13D1Q8NGV5 346 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
TRIM4-201ENST00000349062 SLC35D1Q9NTN3 355 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 HSPB7Q9UBY9 170 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
TRIM4-201ENST00000349062 IGHV3-21A0A0B4J1V1 117 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 C1QTNF9BB2RNN3 333 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 NDUFB3O43676 98 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 CD3EP07766 207 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 C1QTNF9P0C862 333 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 SLC25A6P12236 298 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 CHRNB4P30926 498 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 TMPRSS3P57727 454 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 PDLIM3Q53GG5 364 aaPredicted RBP11.42□□□□□ -0.58
TRIM4-201ENST00000349062 TMEM183AQ8IXX5 376 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 RPP25LQ8N5L8 163 aaKnown RBP11.42□□□□□ -0.58
TRIM4-201ENST00000349062 ZBTB34Q8NCN2 500 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 SDF2L1Q9HCN8 221 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 TUBG2Q9NRH3 451 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 TMEM106BQ9NUM4 274 aa11.42□□□□□ -0.58
TRIM4-201ENST00000349062 A8MWP6 167 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 DVL1O14640 695 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 RAB29O14966 203 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 HPRT1P00492 218 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 LHBP01229 141 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 GATA2P23769 480 aaPredicted RBP11.41□□□□□ -0.58
TRIM4-201ENST00000349062 MAS1LP35410 378 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 HTD2P86397 168 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 JOSD1Q15040 202 aaPredicted RBP11.41□□□□□ -0.58
TRIM4-201ENST00000349062 TMEM241Q24JQ0 296 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 BSXQ3C1V8 233 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 RNASE6Q93091 150 aaKnown RBP11.41□□□□□ -0.58
TRIM4-201ENST00000349062 ITPR1Q14643 2758 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 hADV38S2A0JD32 116 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 PAX5Q02548 391 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 C10orf55Q5SWW7 151 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 MIC13Q5XKP0 118 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 OR4A47Q6IF82 309 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 TCF23Q7RTU1 214 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 OR10W1Q8NGF6 305 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 IDI2-AS1Q9NZ38 188 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 REG1AP05451 166 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 NGBQ9NPG2 151 aa11.41□□□□□ -0.58
TRIM4-201ENST00000349062 A6NNC1 897 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 YPEL1O60688 119 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 SPCS3P61009 180 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 ZNF788Q6ZQV5 615 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 OR4S2Q8NH73 311 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 YPEL2Q96QA6 119 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 MRPL20Q9BYC9 149 aaKnown RBP11.4□□□□□ -0.58
TRIM4-201ENST00000349062 TCF19Q9Y242 345 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 LHFPL4Q7Z7J7 247 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 TMEM147Q9BVK8 224 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 FLNCQ14315 2725 aa11.4□□□□□ -0.58
TRIM4-201ENST00000349062 CRYBG3Q68DQ2 2970 aa11.4□□□□□ -0.59
TRIM4-201ENST00000349062 A0A1B0GW64 132 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 A0A1W2PPV4 95 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 IFNA1P01562 189 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 GNB2P62879 340 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 TMEM200BQ69YZ2 307 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 HRNRQ86YZ3 2850 aaPredicted RBP11.39□□□□□ -0.59
TRIM4-201ENST00000349062 ZNF320A2RRD8 509 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 B4DEV8 164 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
TRIM4-201ENST00000349062 GNB1P62873 340 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 LRRC10Q5BKY1 277 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 TRAT1Q6PIZ9 186 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 FAM169BQ8N8A8 192 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 TMEM18Q96B42 140 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 ZNF714Q96N38 554 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 SRRM4A7MD48 611 aaKnown RBP11.39□□□□□ -0.59
TRIM4-201ENST00000349062 PAGE4O60829 102 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 CD1BP29016 333 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 PNRC1Q12796 327 aaPredicted RBP11.39□□□□□ -0.59
TRIM4-201ENST00000349062 TMEM14EPQ6UXP3 125 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 RAB24Q969Q5 203 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 HARBI1Q96MB7 349 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 ELOVL5Q9NYP7 299 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 MSRB2Q9Y3D2 182 aa11.39□□□□□ -0.59
TRIM4-201ENST00000349062 C15orf62A8K5M9 175 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 CD24P25063 80 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 FAM78BQ5VT40 261 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 C1orf174Q8IYL3 243 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 MUC15Q8N387 334 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms