RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 HS3ST3B1Q9Y662 390 aa9.46□□□□□ -0.9
SMARCE1-202ENST00000348513 MSGN1A6NI15 193 aa9.46□□□□□ -0.9
SMARCE1-202ENST00000348513 RTN4RQ9BZR6 473 aa9.46□□□□□ -0.9
SMARCE1-202ENST00000348513 C17orf51A8MQB3 221 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 COX6B1P14854 86 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 FXYD3Q14802 87 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 TIAF1O95411 115 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 COL8A1P27658 744 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 NEUROG3Q9Y4Z2 214 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 A0A087X0K7 114 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 APOBEC3AP31941 199 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 STPG4Q8N801 248 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 BEX4Q9NWD9 120 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 UNC13CQ8NB66 2214 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 IGHV2OR16-5A0A0B4J2B6 119 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 A8MWL6 223 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 ORM1P02763 201 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 ZNF708P17019 499 aa9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 KIR2DL2P43627 348 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-202ENST00000348513 A0A0U1RQV5 110 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 ITLN1Q8WWA0 313 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 CTHRC1Q96CG8 243 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 AMELYQ99218 206 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 C1RLQ9NZP8 487 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 FAM222BQ8WU58 562 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 DNM1P46Q6ZS02 220 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 DYNLRB2Q8TF09 96 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 DLX4Q92988 240 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 TDRD6O60522 2096 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 DXOO77932 396 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 COX6A1P12074 109 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 C1orf122Q6ZSJ8 110 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 V9GYY9 64 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 WNK3Q9BYP7 1800 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 KIF13BQ9NQT8 1826 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 LOC101059948A0A1B0GTJ6 334 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 GAS1P54826 345 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 FAM27BQ5VT28 67 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 GNB1LQ9BYB4 327 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 SELENOKQ9Y6D0 94 aa9.44□□□□□ -0.9
SMARCE1-202ENST00000348513 MMP23AO75900 390 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 EVI2AP22794 236 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 ERVK11-1P61568 191 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 PQLC2Q6ZP29 291 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 SRSF8Q9BRL6 282 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 SRXN1Q9BYN0 137 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 DICER1Q9UPY3 1922 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 PRR19A6NJB7 356 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 OR9G9P0C7N8 305 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 SYT8Q8NBV8 401 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 PRR33A8MZF0 331 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 RBX1P62877 108 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 ZP4Q12836 540 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 C10orf113Q5VZT2 155 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 GAGE2AQ6NT46 116 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 ZNF714Q96N38 554 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 TRBV7-9A0A0J9YWB2 115 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 HBBP68871 147 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 SLC25A2Q9BXI2 301 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 AICDAQ9GZX7 198 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 LY75O60449 1722 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 IGHV2-26A0A0B4J1V2 119 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 KIR2DL5BA0A0G2JN68 375 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 KIR2DL5BA0A0G2JPC4 375 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 A0A1W2PPC1 479 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 OR11H12B2RN74 326 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 G3V4G9 280 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 LGALS3P17931 250 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 TCTEX1D4Q5JR98 221 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 KIR2DL5AQ8N109 375 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 OR11H1Q8NG94 326 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 OR11H2Q8NH07 326 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 RAX2Q96IS3 184 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 PRNDQ9UKY0 176 aa9.43□□□□□ -0.9
SMARCE1-202ENST00000348513 NGFRP08138 427 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 CD40P25942 277 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 CA7P43166 264 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 C9orf172C9J069 976 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 TRAV8-6A0A0B4J262 113 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 MGPP08493 103 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 IGLC2P0DOY2 106 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 IGLC3P0DOY3 106 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 GFRA1P56159 465 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 PGLYRP4Q96LB8 373 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 ZNFX1Q9P2E3 1918 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-202ENST00000348513 DSPPQ9NZW4 1301 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 TPRP12270 2363 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 OR2H2O95918 312 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 C1QTNF9P0C862 333 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 CDKN1AP38936 164 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 K7N7A8 449 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 LY6G6FQ5SQ64 297 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 CCDC144NLQ6NUI1 221 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 366.8 ms