RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OR9G4Q8NGQ1 327 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 OR1L6Q8NGR2 347 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 LSM10Q969L4 123 aaKnown RBP12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 PRRT1Q99946 306 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 TRBV7-1A0A0A6YYK4 115 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 TRAV3A0A0B4J244 114 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 E7EUB6 86 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 H0Y980 276 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 GGCTO75223 188 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 REG1AP05451 166 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 OR13C7P0DN81 318 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 TNFSF8P32971 234 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 FAUP35544 74 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 AKR1C2P52895 323 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 ZNF45Q02386 682 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 CD69Q07108 199 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 SURF2Q15527 256 aaPredicted RBP12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 TRIM16LQ309B1 348 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 RNASE11Q8TAA1 199 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 PRR25Q96S07 402 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 SCP2D1Q9UJQ7 156 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 CMYA5Q8N3K9 4069 aa12.11□□□□□ -0.47
TSPAN4-201ENST00000346501 TEX13DA0A0J9YY54 714 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 C3orf85A0A1B0GTC6 90 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 ZNF701M0R085 212 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 CTSDP07339 412 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 MYOD1P15172 320 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 PI3P19957 117 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 AP3S2P59780 193 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 SLC25A24Q6NUK1 477 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 MARCH1Q8TCQ1 289 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 PDCD10Q9BUL8 212 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 NSG2Q9Y328 171 aa12.1□□□□□ -0.47
TSPAN4-201ENST00000346501 IGLC7A0M8Q6 106 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 NDUFB8O95169 186 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 ARL3P36405 182 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 FAM106AQ4KMX7 169 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 PYDC2Q56P42 97 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 GDPD1Q8N9F7 314 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 OR4D10Q8NGI6 311 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 OR13C8Q8NGS7 320 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 MRGPRFQ96AM1 343 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 NXF2Q9GZY0 626 aaKnown RBP12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 MCUBQ9NWR8 336 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 TGP01266 2768 aa12.09□□□□□ -0.47
TSPAN4-201ENST00000346501 IGLV11-55A0A075B6I3 123 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 A0A1B0GW64 132 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 TRBV12-3P01733 135 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 CLEC19AQ6UXS0 136 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 OR10W1Q8NGF6 305 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 OR4C16Q8NGL9 310 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 NDUFA4L2Q9NRX3 87 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 KCNIP3Q9Y2W7 256 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 SMAD5-AS1Q9Y6J3 95 aa12.08□□□□□ -0.48
TSPAN4-201ENST00000346501 ANKRD20A5PA0PJZ0 165 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 CGB1A6NKQ9 187 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 BMPR1BO00238 502 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 GP9P14770 177 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 SPNP16150 400 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 ERHP84090 104 aaKnown RBP12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 SPANXN2Q5MJ10 180 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 LCN12Q6JVE5 192 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 FAAP20Q6NZ36 180 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 VN1R17PQ8TDU5 208 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 B9D2Q9BPU9 175 aa12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 THAP7Q9BT49 309 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-201ENST00000346501 SORL1Q92673 2214 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 PIGBOS1A0A0B4J2F0 54 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 IFNA17P01571 189 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 IGLV1-51P01701 117 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 IGHV3-23P01764 117 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 INPP1P49441 399 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 DHODHQ02127 395 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 KLK9Q2XQG4 91 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 PLET1Q6UQ28 207 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 C19orf35Q6ZS72 473 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 TOMM5Q8N4H5 51 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 OR51S1Q8NGJ8 323 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 TP53RKQ96S44 253 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 PLEKHA3Q9HB20 300 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 PALMDQ9NP74 551 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 ENY2Q9NPA8 101 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 GAR1Q9NY12 217 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 SIGLEC8Q9NYZ4 499 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 NDUFA13Q9P0J0 144 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 KLK9Q9UKQ9 250 aa12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 F11RQ9Y624 299 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-201ENST00000346501 ZNF320A2RRD8 509 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 PPP5D1E7EU14 171 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms