RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MECP2P51608 486 aaKnown RBP10.95□□□□□ -0.66
HMGN3-202ENST00000344726 ERVK-16P61578 105 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 WT1-ASQ06250 92 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 TATDN3Q17R31 274 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 LPCAT3Q6P1A2 487 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 CLEC19AQ6UXS0 136 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 DYNC2LI1Q8TCX1 351 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 RYR2Q92736 4967 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 RGS5O15539 181 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 TPPPO94811 219 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 OR2C1O95371 312 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 DHFRP00374 187 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 TRAPPC2P0DI81 140 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 TRAPPC2BP0DI82 140 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 DEFA4P12838 97 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 HIST1H1BP16401 226 aaKnown RBP10.94□□□□□ -0.66
HMGN3-202ENST00000344726 PI3P19957 117 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 RNASE10Q5GAN6 216 aaKnown RBP10.94□□□□□ -0.66
HMGN3-202ENST00000344726 SLC38A6Q8IZM9 456 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 CADM3Q8N126 398 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 RAB2BQ8WUD1 216 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 SEC22AQ96IW7 307 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 SRSF8Q9BRL6 282 aaKnown RBP10.94□□□□□ -0.66
HMGN3-202ENST00000344726 THAP7Q9BT49 309 aaPredicted RBP10.94□□□□□ -0.66
HMGN3-202ENST00000344726 NDUFA4L2Q9NRX3 87 aa10.94□□□□□ -0.66
HMGN3-202ENST00000344726 GGCTO75223 188 aaKnown RBP10.93□□□□□ -0.66
HMGN3-202ENST00000344726 CD74P04233 296 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 SERPINE2P07093 398 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 OR13C7P0DN81 318 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 ARL3P36405 182 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 MFAP2P55001 183 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 TMBIM6P55061 237 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 FAM209BQ5JX69 171 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 GDPD1Q8N9F7 314 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 OR1L8Q8NGR8 309 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 MRGPRFQ96AM1 343 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 EEF1AKMT3Q96AZ1 226 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 FAM212BQ9NTI7 297 aaPredicted RBP10.93□□□□□ -0.66
HMGN3-202ENST00000344726 TMEM14BQ9NUH8 114 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 CCDC59Q9P031 241 aaKnown RBP10.93□□□□□ -0.66
HMGN3-202ENST00000344726 PEMTQ9UBM1 199 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 OR51B2Q9Y5P1 312 aa10.93□□□□□ -0.66
HMGN3-202ENST00000344726 STARD9Q9P2P6 4700 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 C15orf61A6NNL5 157 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 GABARAPH6UMI1 98 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 IFNA6P05013 189 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 IGHV4-30-4P0DP06 118 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 TBPP20226 339 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 PTBP1P26599 531 aaKnown RBP eCLIP10.92□□□□□ -0.66
HMGN3-202ENST00000344726 RND3P61587 244 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 GPHB5Q86YW7 130 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 ARRDC1Q8N5I2 433 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 TMEM229BQ8NBD8 167 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 ZNF502Q8TBZ5 544 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 BCL7BQ9BQE9 202 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 HINT2Q9BX68 163 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 ZC4H2Q9NQZ6 224 aa10.92□□□□□ -0.66
HMGN3-202ENST00000344726 TRBV7-1A0A0A6YYK4 115 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 C2orf70A6NJV1 201 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 H0Y980 276 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 H3BMQ9 156 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 LGALS9O00182 355 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 SNAPC5O75971 98 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 CLEC3BP05452 202 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 PGAM2P15259 253 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 S100GP29377 79 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 RPL5P46777 297 aaKnown RBP10.91□□□□□ -0.66
HMGN3-202ENST00000344726 PPP5CP53041 499 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 PIGPP57054 158 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 TAS2R19P59542 299 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 CD300EQ496F6 205 aaPredicted RBP10.91□□□□□ -0.66
HMGN3-202ENST00000344726 THOC7Q6I9Y2 204 aaKnown RBP10.91□□□□□ -0.66
HMGN3-202ENST00000344726 FAAP20Q6NZ36 180 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 Q8N402 240 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 C15orf40Q8WUR7 153 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 CACNG8Q8WXS5 425 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 LSM10Q969L4 123 aaKnown RBP10.91□□□□□ -0.66
HMGN3-202ENST00000344726 CXorf58Q96LI9 332 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 RCHY1Q96PM5 261 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 TP53RKQ96S44 253 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 SLIRPQ9GZT3 109 aaKnown RBP10.91□□□□□ -0.66
HMGN3-202ENST00000344726 C19orf73Q9NVV2 129 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 PRNDQ9UKY0 176 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 SELENOKQ9Y6D0 94 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 SACSQ9NZJ4 4579 aa10.91□□□□□ -0.66
HMGN3-202ENST00000344726 RAB3DO95716 219 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 FOLR2P14207 255 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 GPR183P32249 361 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 IZUMO4Q1ZYL8 232 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 LCN12Q6JVE5 192 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 STEAP1BQ6NZ63 245 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 HSD17B13Q7Z5P4 300 aaPredicted RBP10.9□□□□□ -0.66
HMGN3-202ENST00000344726 OR5B3Q8NH48 314 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 TERB2Q8NHR7 220 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 SMIM4Q8WVI0 70 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 ISOC1Q96CN7 298 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 ZNF486Q96H40 463 aaPredicted RBP10.9□□□□□ -0.66
HMGN3-202ENST00000344726 DIRAS2Q96HU8 199 aa10.9□□□□□ -0.66
HMGN3-202ENST00000344726 F11RQ9Y624 299 aaKnown RBP10.9□□□□□ -0.66
HMGN3-202ENST00000344726 CSMD3Q7Z407 3707 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms