RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PATJQ8NI35 1801 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 FCGR2BP31994 310 aaPredicted RBP15.26■□□□□ 0.03
SMC4-201ENST00000344722 C1QTNF5Q9BXJ0 243 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 LINC00470Q9BZP3 86 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 FAM169BQ8N8A8 192 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 SEMA5BQ9P283 1151 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 IGKV3D-11A0A0A0MRZ8 115 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 TRGV8A0A0C4DH27 118 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 IFNL4K9M1U5 179 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 OR4C13Q8NGP0 309 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 PLPPR1Q8TBJ4 325 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 LYZL4Q96KX0 146 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 H3BTX0 84 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 ZNF418Q8TF45 676 aaPredicted RBP15.25■□□□□ 0.03
SMC4-201ENST00000344722 DIRC2Q96SL1 478 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 RSPO4Q2I0M5 234 aaPredicted RBP15.25■□□□□ 0.03
SMC4-201ENST00000344722 TM4SF20Q53R12 229 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 IGHV2-5P01817 119 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 TMEM256Q8N2U0 113 aa15.25■□□□□ 0.03
SMC4-201ENST00000344722 CTSSP25774 331 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 UNQ5815/PRO19632Q6UWF5 114 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 KLF14Q8TD94 323 aaPredicted RBP15.24■□□□□ 0.03
SMC4-201ENST00000344722 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
SMC4-201ENST00000344722 LINC00271P0C7V0 271 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 CX3CL1P78423 397 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 SRSF7Q16629 238 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMC4-201ENST00000344722 NRN1LQ496H8 165 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.24■□□□□ 0.03
SMC4-201ENST00000344722 SLC25A53Q5H9E4 307 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 LINC01551Q86U37 167 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 C18orf15Q96N68 181 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 TRBV20OR9-2A0A075B6H5 130 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 RPL39P5Q59GN2 51 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 RAB1BQ9H0U4 201 aa15.24■□□□□ 0.03
SMC4-201ENST00000344722 TDHQ8IZJ6 230 aa15.23■□□□□ 0.03
SMC4-201ENST00000344722 GPR82Q96P67 336 aa15.23■□□□□ 0.03
SMC4-201ENST00000344722 FAM214BQ7L5A3 538 aa15.23■□□□□ 0.03
SMC4-201ENST00000344722 PDCD11Q14690 1871 aaKnown RBP15.23■□□□□ 0.03
SMC4-201ENST00000344722 SCGB1A1P11684 91 aa15.23■□□□□ 0.03
SMC4-201ENST00000344722 HSD52Q0P140 79 aa15.23■□□□□ 0.03
SMC4-201ENST00000344722 CCDC144NLQ6NUI1 221 aa15.23■□□□□ 0.03
SMC4-201ENST00000344722 ITLN1Q8WWA0 313 aa15.23■□□□□ 0.03
SMC4-201ENST00000344722 CACNG8Q8WXS5 425 aa15.23■□□□□ 0.03
SMC4-201ENST00000344722 A0A1W2PRE2 83 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 FAM181BA6NEQ2 426 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 C9JQL5 133 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 CD55P08174 381 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 ORMDL3Q8N138 153 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 FGF11Q92914 225 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 SSBP4Q9BWG4 385 aaPredicted RBP15.22■□□□□ 0.03
SMC4-201ENST00000344722 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 ATP5L2Q7Z4Y8 100 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 REPIN1Q9BWE0 567 aaKnown RBP15.22■□□□□ 0.03
SMC4-201ENST00000344722 LEAP2Q969E1 77 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 WDR83OSQ9Y284 106 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 TMEM144Q7Z5S9 345 aa15.22■□□□□ 0.03
SMC4-201ENST00000344722 MFAP4P55083 255 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 FAM53AQ6NSI3 398 aaPredicted RBP15.21■□□□□ 0.03
SMC4-201ENST00000344722 TMEM186Q96B77 213 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 FOXC2Q99958 501 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 OR10J6PQ8NGY7 276 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 MOSP00540 346 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 C20orf144Q9BQM9 153 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 DUSP15Q9H1R2 295 aaPredicted RBP15.21■□□□□ 0.03
SMC4-201ENST00000344722 KLF2Q9Y5W3 355 aaPredicted RBP15.21■□□□□ 0.03
SMC4-201ENST00000344722 IGHV1-69-2A0A0G2JMI3 117 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 CD3EP07766 207 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 CFPP27918 469 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 ID1P41134 155 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 DLX6P56179 175 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 OR52E5Q8NH55 327 aa15.21■□□□□ 0.03
SMC4-201ENST00000344722 COPS9Q8WXC6 57 aa15.21■□□□□ 0.02
SMC4-201ENST00000344722 RAXQ9Y2V3 346 aa15.21■□□□□ 0.02
SMC4-201ENST00000344722 C9JCJ5 164 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 RASL11AQ6T310 242 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 ACP7Q6ZNF0 438 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 SNHG12Q9BXW3 62 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 IGHV3-72A0A0B4J1Y9 119 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 TSPAN13O95857 204 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 OSR1Q8TAX0 266 aaPredicted RBP15.2■□□□□ 0.02
SMC4-201ENST00000344722 ZNF319Q9P2F9 582 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 RABAC1Q9UI14 185 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 CIARTQ8N365 385 aaPredicted RBP15.2■□□□□ 0.02
SMC4-201ENST00000344722 C10orf126Q8N4M7 172 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 KLK15Q9H2R5 256 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 REG1AP05451 166 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 TSPOP30536 169 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 PHLDA3Q9Y5J5 127 aa15.2■□□□□ 0.02
SMC4-201ENST00000344722 SCN8AQ9UQD0 1980 aa15.19■□□□□ 0.02
SMC4-201ENST00000344722 PCOLCEQ15113 449 aa15.19■□□□□ 0.02
SMC4-201ENST00000344722 FAM90A2PQ658T7 463 aa15.19■□□□□ 0.02
SMC4-201ENST00000344722 F2RL2O00254 374 aa15.19■□□□□ 0.02
SMC4-201ENST00000344722 PRSS2P07478 247 aa15.19■□□□□ 0.02
SMC4-201ENST00000344722 QRFPP83859 136 aa15.19■□□□□ 0.02
SMC4-201ENST00000344722 SYT8Q8NBV8 401 aa15.19■□□□□ 0.02
SMC4-201ENST00000344722 NHP2Q9NX24 153 aaKnown RBP15.19■□□□□ 0.02
SMC4-201ENST00000344722 POLR3KQ9Y2Y1 108 aaPredicted RBP15.19■□□□□ 0.02
SMC4-201ENST00000344722 SH2D7A6NKC9 451 aaPredicted RBP15.19■□□□□ 0.02
SMC4-201ENST00000344722 TYMSP04818 313 aa15.19■□□□□ 0.02
SMC4-201ENST00000344722 COX6A1P12074 109 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms