RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 AREGP15514 252 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM144Q7Z5S9 345 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 SLC25A45Q8N413 288 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 CACNG8Q8WXS5 425 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM190Q8WZ59 177 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 RAB37Q96AX2 223 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 MS4A5Q9H3V2 200 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 VSIRQ9H7M9 311 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 TRAV17A0A0B4J275 112 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 A0A1W2PRS3 328 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 PPIHO43447 177 aaKnown RBP4.03□□□□□ -1.76
CSMD3-203ENST00000343508 IGLV3-19P01714 112 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 FAM90A1Q86YD7 464 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 TPRX1Q8N7U7 411 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 ONECUT1Q9UBC0 465 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 TRBV6-6A0A0A6YYG2 114 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 A0A1W2PRE2 83 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 LPAR2Q9HBW0 351 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM189A5PLL7 270 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 PRR19A6NJB7 356 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 OTX1P32242 354 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-203ENST00000343508 CALYQ9NYX4 217 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 A0A1B0GUT8 65 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 RBFOX2O43251 390 aaKnown RBP eCLIP4.03□□□□□ -1.76
CSMD3-203ENST00000343508 GCSHP23434 173 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 PCOLCEQ15113 449 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 ASCL4Q6XD76 172 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 CCL17Q92583 94 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 A6NNC1 897 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 YPEL1O60688 119 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 CSRP2Q16527 193 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 MOGAT3Q86VF5 341 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 YPEL2Q96QA6 119 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 SSBP3Q9BWW4 388 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-203ENST00000343508 IGFBP2P18065 325 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 LGALS7P47929 136 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 ARF6P62330 175 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 RPL7P18124 248 aaKnown RBP4.03□□□□□ -1.76
CSMD3-203ENST00000343508 TSPOP30536 169 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM14EPQ6UXP3 125 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 FAM222BQ8WU58 562 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 NABP1Q96AH0 204 aa4.03□□□□□ -1.76
CSMD3-203ENST00000343508 GPR183P32249 361 aa4.03□□□□□ -1.77
CSMD3-203ENST00000343508 Q0VG73 95 aa4.03□□□□□ -1.77
CSMD3-203ENST00000343508 SRSF12Q8WXF0 261 aaKnown RBP4.03□□□□□ -1.77
CSMD3-203ENST00000343508 RSPO3Q9BXY4 272 aaPredicted RBP4.03□□□□□ -1.77
CSMD3-203ENST00000343508 IGHV1-69-2A0A0G2JMI3 117 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 NBEAP1P0C6P0 100 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 ACP7Q6ZNF0 438 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 DNASE2BQ8WZ79 361 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 RND1Q92730 232 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 WBP1Q96G27 269 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 POLR3KQ9Y2Y1 108 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-203ENST00000343508 COX11Q9Y6N1 276 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 ADAMTS9Q9P2N4 1935 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 C7orf71A4D174 169 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 CLPSP04118 112 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 SPINK2P20155 84 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TIMM23BQ5SRD1 257 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 SIGLEC12Q96PQ1 595 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 C20orf144Q9BQM9 153 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TRGV8A0A0C4DH27 118 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 FAM181BA6NEQ2 426 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 ATXN7O15265 892 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-203ENST00000343508 NAPSAO96009 420 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 CRYGSP22914 178 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 C3AR1Q16581 482 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TTC32Q5I0X7 151 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 OSR1Q8TAX0 266 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-203ENST00000343508 C5orf30Q96GV9 206 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 GAGE12BA1L429 117 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 C17orf98A8MV24 154 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 AGFG2O95081 481 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 GPX1P07203 203 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TFPI2P48307 235 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 SPANXN1Q5VSR9 72 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 MYO7AQ13402 2215 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 IGKV1-27A0A075B6S5 117 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 FNDC10F2Z333 226 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TYMSP04818 313 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 STAG3L3P0CL85 134 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 CCL4P13236 92 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 GPR6P46095 362 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TREML4Q6UXN2 200 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 OR4A5Q8NH83 315 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 IDI2-AS1Q9NZ38 188 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 UFC1Q9Y3C8 167 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TRAV24A0A0B4J272 114 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 C12orf77C9JDV5 145 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 Q6ZT83 130 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TMEM256Q8N2U0 113 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 DERL1Q9BUN8 251 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 SNHG12Q9BXW3 62 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 PEX7O00628 323 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 SLC25A17O43808 307 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 GOSR1O95249 250 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 KRTCAP3Q53RY4 240 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 SAMD13Q5VXD3 122 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 SPAG17Q6Q759 2223 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 SIGMAR1Q99720 223 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms