RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PILRBQ9UKJ0 227 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 TRAPPC2LQ9UL33 140 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 FAM90A9PA6NNJ1 464 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 RHBDL1O75783 438 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 LIPFP07098 398 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 MFAP2P55001 183 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 COLCA1Q6ZS62 124 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 OR10AG1Q8NH19 301 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 VSTM2AQ8TAG5 236 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 DPF1Q92782 380 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 SPTBN5Q9NRC6 3674 aaKnown RBP15.35■□□□□ 0.05
SMPD1-201ENST00000342245 RPL8P62917 257 aaKnown RBP15.35■□□□□ 0.05
SMPD1-201ENST00000342245 EIF4EBP1Q13541 118 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-201ENST00000342245 ANKRD37Q7Z713 158 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 TMEM251Q8N6I4 163 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 OR1L3Q8NH93 324 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 A0A0G2JMM0 328 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 A0A1W2PPB8 328 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 TMEM189A5PLL7 270 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 KIR3DP1A8MWS1 328 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 DNPH1O43598 174 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 ZNF497Q6ZNH5 498 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 SHISA6Q6ZSJ9 500 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 FGF23Q9GZV9 251 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-201ENST00000342245 MS4A5Q9H3V2 200 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 HSPB8Q9UJY1 196 aa15.35■□□□□ 0.05
SMPD1-201ENST00000342245 USP34Q70CQ2 3546 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 M0R296 226 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 IGLV2-8P01709 118 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 APOA2P02652 100 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 MGST1P10620 155 aaKnown RBP15.34■□□□□ 0.05
SMPD1-201ENST00000342245 HSD52Q0P140 79 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 IGF2BP2-AS1Q96M15 143 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 LSM4Q9Y4Z0 139 aaKnown RBP15.34■□□□□ 0.05
SMPD1-201ENST00000342245 IGHV3-15A0A0B4J1V0 119 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 ZFAND5O76080 213 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 ZNF841Q6ZN19 808 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 C2orf91Q6ZV80 131 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 MTURNQ8N3F0 131 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 H1FXQ92522 213 aaKnown RBP15.34■□□□□ 0.05
SMPD1-201ENST00000342245 MBD6Q96DN6 1003 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 JMJD8Q96S16 334 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 WDR54Q9H977 334 aa15.34■□□□□ 0.05
SMPD1-201ENST00000342245 MBNL3Q9NUK0 354 aaKnown RBP15.34■□□□□ 0.05
SMPD1-201ENST00000342245 TNRC6BQ9UPQ9 1833 aaKnown RBP15.34■□□□□ 0.05
SMPD1-201ENST00000342245 C22orf46C9J442 243 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 B4GALT1P15291 398 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 TCTEX1D4Q5JR98 221 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 FA2HQ7L5A8 372 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 NHLRC2Q8NBF2 726 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 UCN2Q96RP3 112 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 FOXB1Q99853 325 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 IGHV1-24A0A0C4DH33 117 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 A0A0G2JLM5 398 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 J3QR89 54 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 SYNGR1O43759 233 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 P04436 131 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 MC5RP33032 325 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 NTF4P34130 210 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 RAB9AP51151 201 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 OR52E5Q8NH55 327 aa15.33■□□□□ 0.04
SMPD1-201ENST00000342245 TEPPQ6URK8 271 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 MRPL21Q7Z2W9 205 aaKnown RBP15.32■□□□□ 0.04
SMPD1-201ENST00000342245 PKIBQ9C010 78 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 PRSS46E5RG02 174 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 H3BUT2 72 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 F2RL2O00254 374 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 SMAGPQ0VAQ4 97 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 TMEM95Q3KNT9 176 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 STPG3Q8N7X2 389 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 URB1-AS1Q96HZ7 61 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 GTSF1LQ9H1H1 148 aa15.32■□□□□ 0.04
SMPD1-201ENST00000342245 MYO9BQ13459 2157 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 PATE4P0C8F1 98 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 RPL30P62888 115 aaKnown RBP15.31■□□□□ 0.04
SMPD1-201ENST00000342245 CD300EQ496F6 205 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-201ENST00000342245 NUP35Q8NFH5 326 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 SPACA9Q96E40 222 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-201ENST00000342245 A0A1W2PRE2 83 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 FOXH1O75593 365 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 FTH1P19P0C7X4 201 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 CKS1BP61024 79 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 PSG5Q15238 335 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 WIPI1Q5MNZ9 446 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-201ENST00000342245 GDF5OSQ5U4N7 250 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 Q6P435 159 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 CT55Q8WUE5 264 aa15.31■□□□□ 0.04
SMPD1-201ENST00000342245 FOXL2P58012 376 aa15.3■□□□□ 0.04
SMPD1-201ENST00000342245 LINC01545Q5VT33 79 aa15.3■□□□□ 0.04
SMPD1-201ENST00000342245 SPATA31B1PQ5VZV4 182 aa15.3■□□□□ 0.04
SMPD1-201ENST00000342245 ZC2HC1AQ96GY0 325 aa15.3■□□□□ 0.04
SMPD1-201ENST00000342245 PLEKHA3Q9HB20 300 aa15.3■□□□□ 0.04
SMPD1-201ENST00000342245 SOX21Q9Y651 276 aaPredicted RBP15.3■□□□□ 0.04
SMPD1-201ENST00000342245 SPCS1Q9Y6A9 102 aa15.3■□□□□ 0.04
SMPD1-201ENST00000342245 TNRC6AQ8NDV7 1962 aaKnown RBP15.3■□□□□ 0.04
SMPD1-201ENST00000342245 A0A1W2PPM0 123 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 C17orf98A8MV24 154 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 OR9G9P0C7N8 305 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 NRN1LQ496H8 165 aa15.29■□□□□ 0.04
SMPD1-201ENST00000342245 SPINK9Q5DT21 86 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms