RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 MMP9P14780 707 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 G6PCP35575 357 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 BAXQ07812 192 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL18A1-201ENST00000342220 KIR2DL5AQ8N109 375 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 TMEM37Q8WXS4 190 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 WSB1Q9Y6I7 421 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 IGHV3-72A0A0B4J1Y9 119 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 IGHV1-69-2A0A0G2JMI3 117 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 F2RP25116 425 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 Q5PR19 223 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 WDR25Q64LD2 544 aaPredicted RBP10.8□□□□□ -0.68
COL18A1-201ENST00000342220 SP5Q6BEB4 398 aaPredicted RBP10.8□□□□□ -0.68
COL18A1-201ENST00000342220 ZNF295-AS1Q8N0V1 137 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 ATP5SQ99766 215 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 NAGKQ9UJ70 344 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 HELZ2Q9BYK8 2649 aaKnown RBP10.8□□□□□ -0.68
COL18A1-201ENST00000342220 DUXBA0A1W2PPF3 345 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 RAMP3O60896 148 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 CTXN2P0C2S0 81 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 SELENOTP62341 195 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 RPL23AP62750 156 aaKnown RBP10.8□□□□□ -0.68
COL18A1-201ENST00000342220 DRAM1Q8N682 238 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 NECAP1Q8NC96 275 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 CLDND2Q8NHS1 167 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 RCC1LQ96I51 464 aaKnown RBP10.8□□□□□ -0.68
COL18A1-201ENST00000342220 PAM16Q9Y3D7 125 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 MMP23AO75900 390 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 CLDN1O95832 211 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 Q6ZRM9 215 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 ZNF665Q9H7R5 613 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 IGLV3-9A0A075B6K5 115 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 CD33P20138 364 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 COL8A1P27658 744 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 TAS2R30P59541 319 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 ZNF506Q5JVG8 444 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 Q6ZVH6 145 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 CACNG5Q9UF02 275 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 VAX2Q9UIW0 290 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 CLDN34H7C241 214 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 MGST3O14880 152 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 NDUFB3O43676 98 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 ENSAO43768 121 aaKnown RBP10.79□□□□□ -0.68
COL18A1-201ENST00000342220 PLA2G5P39877 138 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 TOMM20LQ6UXN7 152 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 S100A7AQ86SG5 101 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 GBGT1Q8N5D6 347 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 SLC24A4Q8NFF2 622 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 NRGNQ92686 78 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 RSG1Q9BU20 258 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 CSMD1Q96PZ7 3565 aa10.79□□□□□ -0.68
COL18A1-201ENST00000342220 HRNRQ86YZ3 2850 aaPredicted RBP10.78□□□□□ -0.68
COL18A1-201ENST00000342220 TRAV38-1A0A0B4J264 116 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 APELAP0DMC3 54 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 NUDT11Q96G61 164 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 CALYQ9NYX4 217 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 GNG13Q9P2W3 67 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 HSPB1P04792 205 aaKnown RBP10.78□□□□□ -0.68
COL18A1-201ENST00000342220 OR10J1P30954 320 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 MDH2P40926 338 aaKnown RBP10.78□□□□□ -0.68
COL18A1-201ENST00000342220 TESK1Q15569 626 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 IL22RA2Q969J5 263 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 VSIRQ9H7M9 311 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 ACANP16112 2415 aa10.78□□□□□ -0.68
COL18A1-201ENST00000342220 FLNBO75369 2602 aaKnown RBP10.78□□□□□ -0.68
COL18A1-201ENST00000342220 KIAA1324LA8MWY0 1029 aaPredicted RBP10.77□□□□□ -0.68
COL18A1-201ENST00000342220 TDRG1Q3Y452 100 aa10.77□□□□□ -0.68
COL18A1-201ENST00000342220 SLC35E1Q96K37 410 aa10.77□□□□□ -0.68
COL18A1-201ENST00000342220 BBC3Q96PG8 261 aaPredicted RBP10.77□□□□□ -0.68
COL18A1-201ENST00000342220 MIEN1Q9BRT3 115 aa10.77□□□□□ -0.68
COL18A1-201ENST00000342220 IFNA5P01569 189 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 IGKV1-39P01597 117 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 IGKV1D-39P04432 117 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 RPL30P62888 115 aaKnown RBP10.77□□□□□ -0.69
COL18A1-201ENST00000342220 OR8G2PQ6IF36 304 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 LINC00596Q86U02 117 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 H1FOOQ8IZA3 346 aaPredicted RBP10.77□□□□□ -0.69
COL18A1-201ENST00000342220 ONECUT1Q9UBC0 465 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 ARL16Q0P5N6 197 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 LCN15Q6UWW0 184 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 CLUHP3Q96NS8 147 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 RPRMQ9NS64 109 aa10.77□□□□□ -0.69
COL18A1-201ENST00000342220 ABCA2Q9BZC7 2435 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 ZFP92A6NM28 416 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 C17orf98A8MV24 154 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 FGF8P55075 233 aaPredicted RBP10.76□□□□□ -0.69
COL18A1-201ENST00000342220 MMDQ15546 238 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 LRRC10Q5BKY1 277 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 SPANXN5Q5MJ07 72 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 CST9LP1Q5W188 147 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 OR4C5Q8NGB2 326 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 CELSR2Q9HCU4 2923 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 A0A1B0GU03 582 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 LOC102723971A0A1B0GUV8 181 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF320A2RRD8 509 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF737O75373 536 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 HBE1P02100 147 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 RAB11AP62491 216 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 FAM169BQ8N8A8 192 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 SEPSECSQ9HD40 501 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms