RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 AARDQ4LEZ3 155 aa11.02□□□□□ -0.65
PMS1-201ENST00000342075 VSTM2AQ8TAG5 236 aa11.02□□□□□ -0.65
PMS1-201ENST00000342075 PPP1R14BQ96C90 147 aa11.02□□□□□ -0.65
PMS1-201ENST00000342075 ARL6Q9H0F7 186 aa11.02□□□□□ -0.65
PMS1-201ENST00000342075 LINC00527Q9UJ94 153 aa11.02□□□□□ -0.65
PMS1-201ENST00000342075 PRNDQ9UKY0 176 aa11.02□□□□□ -0.65
PMS1-201ENST00000342075 E5RGE8 158 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
PMS1-201ENST00000342075 PET100P0DJ07 73 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 VDAC2P45880 294 aaPredicted RBP11.01□□□□□ -0.65
PMS1-201ENST00000342075 ARHGDIBP52566 201 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 SPCS3P61009 180 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 HAPLN4Q86UW8 402 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 OR2C3Q8N628 320 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 HEYLQ9NQ87 328 aaPredicted RBP11.01□□□□□ -0.65
PMS1-201ENST00000342075 SRP14P37108 136 aaKnown RBP11.01□□□□□ -0.65
PMS1-201ENST00000342075 TMUB2Q71RG4 321 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 TMEM252Q8N6L7 170 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 SIGLECL1Q8N7X8 197 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 ZC4H2Q9NQZ6 224 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 NDUFA4L2Q9NRX3 87 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 LYRM2Q9NU23 88 aaPredicted RBP11.01□□□□□ -0.65
PMS1-201ENST00000342075 HMSDA8MTL9 139 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 CNIH1O95406 144 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 IER3P46695 156 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 COMPP49747 757 aaPredicted RBP11.01□□□□□ -0.65
PMS1-201ENST00000342075 BLCAPP62952 87 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 CX3CL1P78423 397 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 PRCDQ00LT1 54 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 DEFA5Q01523 94 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 EWSR1Q01844 656 aaKnown RBP eCLIP11.01□□□□□ -0.65
PMS1-201ENST00000342075 CLINT1Q14677 625 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 OR8G2PQ6IF36 304 aa11.01□□□□□ -0.65
PMS1-201ENST00000342075 INO80EQ8NBZ0 244 aaPredicted RBP11.01□□□□□ -0.65
PMS1-201ENST00000342075 SRSF12Q8WXF0 261 aaKnown RBP11.01□□□□□ -0.65
PMS1-201ENST00000342075 ACTL6BO94805 426 aa11□□□□□ -0.65
PMS1-201ENST00000342075 TMEM65Q6PI78 240 aa11□□□□□ -0.65
PMS1-201ENST00000342075 SSMEM1Q8WWF3 244 aa11□□□□□ -0.65
PMS1-201ENST00000342075 WFDC1Q9HC57 220 aa11□□□□□ -0.65
PMS1-201ENST00000342075 JMJD1CQ15652 2540 aa11□□□□□ -0.65
PMS1-201ENST00000342075 PIGBOS1A0A0B4J2F0 54 aa11□□□□□ -0.65
PMS1-201ENST00000342075 IGHV3-48P01763 117 aa11□□□□□ -0.65
PMS1-201ENST00000342075 ACOT7LQ6ZUV0 252 aa11□□□□□ -0.65
PMS1-201ENST00000342075 MMD2Q8IY49 270 aa11□□□□□ -0.65
PMS1-201ENST00000342075 C5orf56Q8N8D9 126 aa11□□□□□ -0.65
PMS1-201ENST00000342075 RBM14Q96PK6 669 aaKnown RBP11□□□□□ -0.65
PMS1-201ENST00000342075 AIFM2Q9BRQ8 373 aa11□□□□□ -0.65
PMS1-201ENST00000342075 PLEKHA3Q9HB20 300 aa11□□□□□ -0.65
PMS1-201ENST00000342075 RFNGQ9Y644 331 aa11□□□□□ -0.65
PMS1-201ENST00000342075 IGHV7-81A0A0B4J1V7 117 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 A6NDX4 124 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 C15orf62A8K5M9 175 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 TEX22C9J3V5 150 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 FAM90A26D6RGX4 464 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 PRH1P02810 166 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 FXYD3Q14802 87 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 ABHD5Q8WTS1 349 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 FBXL17Q9UF56 701 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 IGLC7A0M8Q6 106 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 IFNA10P01566 189 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 OR13C7P0DN81 318 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 CD99P14209 185 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 RPL27AP46776 148 aaKnown RBP10.99□□□□□ -0.65
PMS1-201ENST00000342075 P2RY1P47900 373 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 C9orf152Q5JTZ5 239 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 OR1L8Q8NGR8 309 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 OR5B3Q8NH48 314 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 OR4A5Q8NH83 315 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 AQP10Q96PS8 301 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 RAB40CQ96S21 281 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 RNF5Q99942 180 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 WSB1Q9Y6I7 421 aa10.99□□□□□ -0.65
PMS1-201ENST00000342075 INAFM1C9JVW0 142 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 SPDEFO95238 335 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 FGF2P09038 288 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 PVALBP20472 110 aaPredicted RBP10.98□□□□□ -0.65
PMS1-201ENST00000342075 MLANAQ16655 118 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 OR52E5Q8NH55 327 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 ZNF257Q9Y2Q1 563 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 DYNLT3P51808 116 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 PDLIM3Q53GG5 364 aaPredicted RBP10.98□□□□□ -0.65
PMS1-201ENST00000342075 ASPHD1Q5U4P2 390 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 Q6YL49 198 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 SMIM8Q96KF7 97 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 IGHV3-21A0A0B4J1V1 117 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 S100A11P31949 105 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 MFAP2P55001 183 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 RPL23AP62750 156 aaKnown RBP10.98□□□□□ -0.65
PMS1-201ENST00000342075 SRSF2Q01130 221 aaKnown RBP10.98□□□□□ -0.65
PMS1-201ENST00000342075 OPCMLQ14982 345 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 KCNRGQ8N5I3 272 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 OR5C1Q8NGR4 320 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 RASL11BQ9BPW5 248 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 PARP11Q9NR21 331 aa10.98□□□□□ -0.65
PMS1-201ENST00000342075 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
PMS1-201ENST00000342075 MED6O75586 246 aa10.97□□□□□ -0.65
PMS1-201ENST00000342075 CFDP00746 253 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms