RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SMIM21Q3B7S5 101 aa12.52□□□□□ -0.4
BRAT1-201ENST00000340611 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.4
BRAT1-201ENST00000340611 GATAD1Q8WUU5 269 aa12.52□□□□□ -0.4
BRAT1-201ENST00000340611 EGR1P18146 543 aa12.52□□□□□ -0.41
BRAT1-201ENST00000340611 CBLN1P23435 193 aa12.52□□□□□ -0.41
BRAT1-201ENST00000340611 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.41
BRAT1-201ENST00000340611 NMSQ5H8A3 153 aa12.52□□□□□ -0.41
BRAT1-201ENST00000340611 KCNIP4Q6PIL6 250 aa12.52□□□□□ -0.41
BRAT1-201ENST00000340611 NIT1Q86X76 327 aa12.52□□□□□ -0.41
BRAT1-201ENST00000340611 SIGLECL1Q8N7X8 197 aa12.52□□□□□ -0.41
BRAT1-201ENST00000340611 SLC35D1Q9NTN3 355 aa12.52□□□□□ -0.41
BRAT1-201ENST00000340611 FAM208BQ5VWN6 2430 aa12.52□□□□□ -0.41
BRAT1-201ENST00000340611 IFNA5P01569 189 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 GYPAP02724 150 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 PMCHP20382 165 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 RPL15P61313 204 aaKnown RBP12.51□□□□□ -0.41
BRAT1-201ENST00000340611 CYP2G1PQ6ZSU1 146 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 TAAR3PQ9P1P4 343 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 ATP23Q9Y6H3 246 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 OR4F5Q8NH21 305 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 ST6GALNAC6Q969X2 333 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 PLPPR2Q96GM1 343 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 OR4F4Q96R69 305 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 ERRFI1Q9UJM3 462 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-201ENST00000340611 PXMP4Q9Y6I8 212 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 LRRK2Q5S007 2527 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 CLEC18AA5D8T8 446 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 IAPPP10997 89 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 CRISP2P16562 243 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 VDAC1P21796 283 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 CTRLP40313 264 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 RBM11P57052 281 aaKnown RBP12.51□□□□□ -0.41
BRAT1-201ENST00000340611 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 BAXQ07812 192 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 CLEC18CQ8NCF0 446 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 OR52L2PQ8NGH6 319 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 RTL8AQ9BWD3 113 aa12.51□□□□□ -0.41
BRAT1-201ENST00000340611 ARFGEF3Q5TH69 2177 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 OR5B21A6NL26 309 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 TRAPPC2LH3BP13 241 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 FAM169BQ8N8A8 192 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 OR51H1Q8NH63 302 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 ZNF586Q9NXT0 402 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 HCFC1P51610 2035 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 RNF212BA8MTL3 300 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 HS3ST1O14792 307 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 KBTBD11O94819 623 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 GLRXP35754 106 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 ASCL4Q6XD76 172 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 ZNF295-AS1Q8N0V1 137 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 PLK3Q9H4B4 646 aa12.5□□□□□ -0.41
BRAT1-201ENST00000340611 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.49□□□□□ -0.41
BRAT1-201ENST00000340611 PGPEP1LA6NFU8 196 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 CTXN2P0C2S0 81 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 FAM201AQ5SY85 155 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 MBNL2Q5VZF2 373 aaKnown RBP12.49□□□□□ -0.41
BRAT1-201ENST00000340611 USF3Q68DE3 2245 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 CORTO00230 105 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 KITLGP21583 273 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 RELBQ01201 579 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 ARL16Q0P5N6 197 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 LCN12Q6JVE5 192 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 C11orf53Q8IXP5 236 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 SCGB1C1Q8TD33 95 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 RDH5Q92781 318 aa12.49□□□□□ -0.41
BRAT1-201ENST00000340611 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 TBL2Q9Y4P3 447 aaKnown RBP12.48□□□□□ -0.41
BRAT1-201ENST00000340611 TRAV1-1A0A0B4J248 108 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 UCP1P25874 307 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 AMTP48728 403 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 MORN2Q502X0 79 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 Q8N976 141 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 OR1N2Q8NGR9 330 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 SGMS2Q8NHU3 365 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 MRPL30Q8TCC3 161 aaKnown RBP12.48□□□□□ -0.41
BRAT1-201ENST00000340611 LHX4Q969G2 390 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 DUXBA0A1W2PPF3 345 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 GABRA2P47869 451 aa12.48□□□□□ -0.41
BRAT1-201ENST00000340611 MEF2BQ02080 365 aaPredicted RBP12.47□□□□□ -0.41
BRAT1-201ENST00000340611 ADIPOQQ15848 244 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 WDR73Q6P4I2 378 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 Q6ZRM9 215 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
BRAT1-201ENST00000340611 OR2V2Q96R30 315 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 IGKV1-6A0A0C4DH72 117 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 J3QT63 122 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 SIRPB1O00241 398 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 TYMSP04818 313 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 SRP14P37108 136 aaKnown RBP12.47□□□□□ -0.41
BRAT1-201ENST00000340611 PRRX1P54821 245 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 CCL8P80075 99 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 SAMD13Q5VXD3 122 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
BRAT1-201ENST00000340611 CSMD2Q7Z408 3487 aa12.46□□□□□ -0.41
BRAT1-201ENST00000340611 IGHV3-13P01766 116 aa12.46□□□□□ -0.41
BRAT1-201ENST00000340611 FRMD6-AS1P0C7T7 363 aa12.46□□□□□ -0.41
BRAT1-201ENST00000340611 FGF12P61328 243 aa12.46□□□□□ -0.41
BRAT1-201ENST00000340611 FAM19A2Q8N3H0 131 aa12.46□□□□□ -0.41
BRAT1-201ENST00000340611 UBALD1Q8TB05 177 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms