RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 GPR137BO60478 399 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 DEDDO75618 318 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 CA2P00918 260 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 RLN2P04090 185 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 IL6RP08887 468 aaPredicted RBP11.72□□□□□ -0.53
CSRP1-201ENST00000340006 CTRB1P17538 263 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 LGALSLQ3ZCW2 172 aaPredicted RBP11.72□□□□□ -0.53
CSRP1-201ENST00000340006 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
CSRP1-201ENST00000340006 CTRB2Q6GPI1 263 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 TMEM65Q6PI78 240 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 DCUN1D4Q92564 292 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 QTRT1Q9BXR0 403 aaKnown RBP11.72□□□□□ -0.53
CSRP1-201ENST00000340006 ZFP57Q9NU63 452 aa11.72□□□□□ -0.53
CSRP1-201ENST00000340006 FAM181BA6NEQ2 426 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 TRIM77I1YAP6 450 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 AMY1AP04745 511 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 LYL1P12980 280 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 MYOD1P15172 320 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 FXYD3Q14802 87 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 ZNF562Q6V9R5 426 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 COA4Q9NYJ1 87 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 TNFSF18Q9UNG2 199 aa11.71□□□□□ -0.53
CSRP1-201ENST00000340006 TEX50A0A1B0GTY4 177 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 CLDN34H7C241 214 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 CXCL2P19875 107 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 MAS1LP35410 378 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 POLR2GP62487 172 aaKnown RBP eCLIP11.7□□□□□ -0.54
CSRP1-201ENST00000340006 CX3CL1P78423 397 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 ID3Q02535 119 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 NPFFR1Q9GZQ6 430 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 MFFQ9GZY8 342 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 L7N2F9 121 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 KCNAB3O43448 404 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 AP2S1P53680 142 aaPredicted RBP11.7□□□□□ -0.54
CSRP1-201ENST00000340006 OR1L8Q8NGR8 309 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 PRSS22Q9GZN4 317 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 MAGT1Q9H0U3 335 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 TMEM14BQ9NUH8 114 aa11.7□□□□□ -0.54
CSRP1-201ENST00000340006 FOXA2Q9Y261 457 aaPredicted RBP11.7□□□□□ -0.54
CSRP1-201ENST00000340006 RCL1Q9Y2P8 373 aaKnown RBP11.7□□□□□ -0.54
CSRP1-201ENST00000340006 MSGN1A6NI15 193 aa11.69□□□□□ -0.54
CSRP1-201ENST00000340006 HLA-DRB1P01911 266 aa11.69□□□□□ -0.54
CSRP1-201ENST00000340006 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
CSRP1-201ENST00000340006 UBA52P62987 128 aaKnown RBP11.69□□□□□ -0.54
CSRP1-201ENST00000340006 MRGPRG-AS1Q2M3A8 158 aa11.69□□□□□ -0.54
CSRP1-201ENST00000340006 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
CSRP1-201ENST00000340006 ZNF429Q86V71 674 aa11.69□□□□□ -0.54
CSRP1-201ENST00000340006 INO80EQ8NBZ0 244 aaPredicted RBP11.69□□□□□ -0.54
CSRP1-201ENST00000340006 HSPB9Q9BQS6 159 aa11.69□□□□□ -0.54
CSRP1-201ENST00000340006 IGHV7-81A0A0B4J1V7 117 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 RNF222A6NCQ9 220 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 WRBO00258 174 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 SSSCA1O60232 199 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 RNASE1P07998 156 aaKnown RBP11.68□□□□□ -0.54
CSRP1-201ENST00000340006 APELAP0DMC3 54 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 RPL27AP46776 148 aaKnown RBP11.68□□□□□ -0.54
CSRP1-201ENST00000340006 COMPP49747 757 aaPredicted RBP11.68□□□□□ -0.54
CSRP1-201ENST00000340006 LURAP1LQ8IV03 231 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 OR5B3Q8NH48 314 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 FAM103A1Q9BTL3 118 aaKnown RBP11.68□□□□□ -0.54
CSRP1-201ENST00000340006 ENY2Q9NPA8 101 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 LINC01548A6NM66 108 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 CEBPZOSA8MTT3 80 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 E5RGE8 158 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 E7EUB6 86 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 FGF2P09038 288 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 SPCS3P61009 180 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 C10orf55Q5SWW7 151 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 Q6ZS46 218 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 ACOT7LQ6ZUV0 252 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 SLC35E3Q7Z769 313 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
CSRP1-201ENST00000340006 PARP11Q9NR21 331 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 ZNF257Q9Y2Q1 563 aa11.68□□□□□ -0.54
CSRP1-201ENST00000340006 FAM90A26D6RGX4 464 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
CSRP1-201ENST00000340006 TNFRSF9Q07011 255 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 OR2F1Q13607 317 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 ZNF345Q14585 488 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 ARPC1AQ92747 370 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 ARL6Q9H0F7 186 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 HSPB7Q9UBY9 170 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 MED6O75586 246 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 S100A11P31949 105 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 NUP62P37198 522 aaPredicted RBP11.67□□□□□ -0.54
CSRP1-201ENST00000340006 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
CSRP1-201ENST00000340006 OR10W1Q8NGF6 305 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 OR52E5Q8NH55 327 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 NDUFA4L2Q9NRX3 87 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 LINC00527Q9UJ94 153 aa11.67□□□□□ -0.54
CSRP1-201ENST00000340006 SYNGR2O43760 224 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 TSC22D2O75157 780 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 IGHG2P01859 326 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
CSRP1-201ENST00000340006 B2MP61769 119 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 TMEM267Q0VDI3 215 aaPredicted RBP11.66□□□□□ -0.54
CSRP1-201ENST00000340006 TMUB2Q71RG4 321 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms