RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PLEKHA3Q9HB20 300 aa12.5□□□□□ -0.41
MBD1-203ENST00000339998 LOC102723971A0A1B0GUV8 181 aa12.5□□□□□ -0.41
MBD1-203ENST00000339998 NDUFA2O43678 99 aa12.5□□□□□ -0.41
MBD1-203ENST00000339998 ZNF506Q5JVG8 444 aa12.5□□□□□ -0.41
MBD1-203ENST00000339998 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
MBD1-203ENST00000339998 MBD3L1Q8WWY6 194 aa12.5□□□□□ -0.41
MBD1-203ENST00000339998 YIF1AO95070 293 aa12.49□□□□□ -0.41
MBD1-203ENST00000339998 PPOXP50336 477 aa12.49□□□□□ -0.41
MBD1-203ENST00000339998 POU2AF1Q16633 256 aa12.49□□□□□ -0.41
MBD1-203ENST00000339998 OR10A7Q8NGE5 316 aa12.49□□□□□ -0.41
MBD1-203ENST00000339998 H3BQ15 152 aa12.49□□□□□ -0.41
MBD1-203ENST00000339998 BCL2P10415 239 aa12.49□□□□□ -0.41
MBD1-203ENST00000339998 KIAA0141Q14154 515 aaPredicted RBP12.49□□□□□ -0.41
MBD1-203ENST00000339998 ZNF430Q9H8G1 570 aaPredicted RBP12.49□□□□□ -0.41
MBD1-203ENST00000339998 DOPEY1Q5JWR5 2465 aa12.49□□□□□ -0.41
MBD1-203ENST00000339998 CGB1A6NKQ9 187 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 IGLV2-23P01705 113 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 HBE1P02100 147 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 IGFBP2P18065 325 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 DPPA3Q6W0C5 159 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 CENPVQ7Z7K6 275 aaPredicted RBP12.48□□□□□ -0.41
MBD1-203ENST00000339998 IGKV1OR2-108A0A075B7D4 117 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 BTBD17A6NE02 478 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 PRB1P04280 392 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 PDLIM3Q53GG5 364 aaPredicted RBP12.48□□□□□ -0.41
MBD1-203ENST00000339998 SPATA31B1PQ5VZV4 182 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 ZFP82Q8N141 532 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 PARD6GQ9BYG4 376 aaPredicted RBP12.48□□□□□ -0.41
MBD1-203ENST00000339998 PRNDQ9UKY0 176 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 TRAV1-1A0A0B4J248 108 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 UBE2G2P60604 165 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 RPL8P62917 257 aaKnown RBP12.48□□□□□ -0.41
MBD1-203ENST00000339998 FBLN7Q53RD9 439 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 OR8B3Q8NGG8 313 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 OR4C13Q8NGP0 309 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 OR8B2Q96RD0 313 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 GGTLC1Q9BX51 225 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 COMMD5Q9GZQ3 224 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 TIMM9Q9Y5J7 89 aa12.48□□□□□ -0.41
MBD1-203ENST00000339998 A0A1W2PPH5 198 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 IGLV1-47P01700 117 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 WT1-ASQ06250 92 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 OSR1Q8TAX0 266 aaPredicted RBP12.47□□□□□ -0.41
MBD1-203ENST00000339998 RAB39BQ96DA2 213 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 HILPDAQ9Y5L2 63 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 PXMP4Q9Y6I8 212 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 RNF224P0DH78 156 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 HLA-DRB5Q30154 266 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 TMEM177Q53S58 311 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 WASHC3Q9Y3C0 194 aa12.47□□□□□ -0.41
MBD1-203ENST00000339998 RPP30P78346 268 aaKnown RBP12.46□□□□□ -0.41
MBD1-203ENST00000339998 SSBP2P81877 361 aaPredicted RBP12.46□□□□□ -0.41
MBD1-203ENST00000339998 ZNF674Q2M3X9 581 aa12.46□□□□□ -0.41
MBD1-203ENST00000339998 FAM90A2PQ658T7 463 aa12.46□□□□□ -0.41
MBD1-203ENST00000339998 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.41
MBD1-203ENST00000339998 LINC00311Q8N616 119 aa12.46□□□□□ -0.41
MBD1-203ENST00000339998 OR2T6Q8NHC8 308 aa12.46□□□□□ -0.41
MBD1-203ENST00000339998 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.41
MBD1-203ENST00000339998 A0A087X0M5 115 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 TRBV23-1A0A0A0MS06 115 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 IGHV3-21A0A0B4J1V1 117 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 A0A1B0GX30 115 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 COLCA2A8K830 154 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 ACTL6BO94805 426 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 SFTPCP11686 197 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 CD81P60033 236 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 MRGPRG-AS1Q2M3A8 158 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 OR4P4Q8NGL7 312 aa12.46□□□□□ -0.42
MBD1-203ENST00000339998 SEPSECSQ9HD40 501 aaKnown RBP12.46□□□□□ -0.42
MBD1-203ENST00000339998 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 BUB1B-PAK6H3BSN5 160 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 PAGE4O60829 102 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 HSPB1P04792 205 aaKnown RBP12.45□□□□□ -0.42
MBD1-203ENST00000339998 CDC34P49427 236 aaPredicted RBP12.45□□□□□ -0.42
MBD1-203ENST00000339998 C4orf17Q53FE4 359 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 KHDC3LQ587J8 217 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 FAM24BQ8N5W8 94 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 C2CD4CQ8TF44 421 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 ABHD5Q8WTS1 349 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 CLEC7AQ9BXN2 247 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 INSIG2Q9Y5U4 225 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 URGCP-MRPS24S4R325 110 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 CRYBA1P05813 215 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 RNASE2P10153 161 aaKnown RBP12.45□□□□□ -0.42
MBD1-203ENST00000339998 ZFP36P26651 326 aaKnown RBP12.45□□□□□ -0.42
MBD1-203ENST00000339998 GNB1P62873 340 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 DLK1P80370 383 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 HCP5Q6MZN7 132 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 C17orf50Q8WW18 174 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 RAB1CQ92928 201 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 NPVFQ9HCQ7 196 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 NDUFA4L2Q9NRX3 87 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 hCG_1809904A0A1W2PP81 198 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 A0A1W2PR64 198 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms