RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 UBE2J1Q9Y385 318 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-202ENST00000339438 MYO18BQ8IUG5 2567 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 TRAF3IP2O43734 574 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-202ENST00000339438 CLDN14O95500 239 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 COX6A1P12074 109 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 MC5RP33032 325 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 SLAQ13239 276 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 GDF5OSQ5U4N7 250 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 CCDC144NLQ6NUI1 221 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 SLC25A47Q6Q0C1 308 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 MDS2Q8NDY4 140 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 PP6455Q8WZ26 134 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 RAB1CQ92928 201 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 OR2V2Q96R30 315 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 DEFB126Q9BYW3 111 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 NPFFR1Q9GZQ6 430 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 PSENENQ9NZ42 101 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 KLRF1Q9NZS2 232 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 OR51B2Q9Y5P1 312 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 SCO2A0A1W2PP80 73 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 EFNA2O43921 213 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 TSPAN13O95857 204 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 P0C879 139 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 SMIM17P0DL12 118 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 ZNF16P17020 682 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-202ENST00000339438 KLF5Q13887 457 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-202ENST00000339438 C5orf64Q2M2E5 130 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 ZNF585BQ52M93 769 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 MMD2Q8IY49 270 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 OR10G3Q8NGC4 313 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 OR10P1Q8NGE3 313 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 OR4A5Q8NH83 315 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 NPCDR1Q9BY65 106 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 ST20Q9HBF5 79 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 PPP1R3CQ9UQK1 317 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 WASHC3Q9Y3C0 194 aa4.63□□□□□ -1.67
CSDE1-202ENST00000339438 SCTP09683 121 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 IAPPP10997 89 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 F2RP25116 425 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 RAB9AP51151 201 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 GCSAMLQ5JQS6 135 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 TMEM164Q5U3C3 297 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 DNM1P34Q6PK57 102 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 LSM10Q969L4 123 aaKnown RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 ZNF48Q96MX3 618 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 CRIM1Q9NZV1 1036 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 PEF1Q9UBV8 284 aaKnown RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 ATRXP46100 2492 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 ZNF407Q9C0G0 2248 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 COL6A6A6NMZ7 2263 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 SERTM2A0A1B0GWG4 89 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 H3BML4 177 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 K7EP34 96 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 PSG2P11465 335 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 LIFP15018 202 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 SRIP30626 198 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 DAP3P51398 398 aaKnown RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 ZNF90Q03938 601 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 TMEM42Q69YG0 159 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 LY96Q9Y6Y9 160 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 DOCK7Q96N67 2140 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 FRG2CA6NGY1 282 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 PDCD6O75340 191 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 FGF6P10767 208 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 CRYBB3P26998 211 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 LOXP28300 417 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 SCGB2A2Q13296 93 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 PDCD1Q15116 288 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 CR1LQ2VPA4 569 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 FOXI2Q6ZQN5 318 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 LINC00696Q6ZRV3 163 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 ANKRD37Q7Z713 158 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 COMMD2Q86X83 199 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 RBMXL3Q8N7X1 1067 aaKnown RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 C11orf52Q96A22 123 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 EAF1Q96JC9 268 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 UCN2Q96RP3 112 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 SPATA25Q9BR10 227 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 YTHDF2Q9Y5A9 579 aaKnown RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 PCNX1Q96RV3 2341 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 SMIM27A0A1W2PRY6 76 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 hDV102S1A0JD36 115 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 VWC2LB2RUY7 222 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 C9JCJ5 164 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 F2RL2O00254 374 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 IGLV2-8P01709 118 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 FOLR3P41439 243 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 SLC38A11Q08AI6 406 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 H1FNTQ75WM6 255 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-202ENST00000339438 OR10W1Q8NGF6 305 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 C1orf159Q96HA4 380 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 METTL7AQ9H8H3 244 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 PIGLQ9Y2B2 252 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 SELENOKQ9Y6D0 94 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 ATP23Q9Y6H3 246 aa4.62□□□□□ -1.67
CSDE1-202ENST00000339438 CR1P17927 2039 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 A0A087X0K7 114 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 IGHV1-45A0A0A0MS14 117 aa4.61□□□□□ -1.67
CSDE1-202ENST00000339438 MDFIC2A0A1B0GVS7 189 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms