RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 APOC4P55056 127 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 TNFRSF9Q07011 255 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 ZNF585BQ52M93 769 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 Q6ZWC4 215 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 LYG2Q86SG7 212 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 DIABLOQ9NR28 239 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 TP53TG1Q9Y2A0 90 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 UFC1Q9Y3C8 167 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 HERC2O95714 4834 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 HECTD4Q9Y4D8 3996 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 FXYD4P59646 89 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 EWSR1Q01844 656 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC01116-202ENST00000339037 MSMO1Q15800 293 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 DEFB135Q30KP9 77 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 TIMM50Q3ZCQ8 353 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 CEMP1Q6PRD7 247 aaPredicted RBP11.63□□□□□ -0.55
LINC01116-202ENST00000339037 SLC38A6Q8IZM9 456 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 SPAG16Q8N0X2 631 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 OR2C3Q8N628 320 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 OR4A5Q8NH83 315 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 AIFM2Q9BRQ8 373 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 SLC5A7Q9GZV3 580 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 HRASLSQ9HDD0 168 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 BET1LQ9NYM9 111 aa11.63□□□□□ -0.55
LINC01116-202ENST00000339037 MRPL27Q9P0M9 148 aaKnown RBP11.63□□□□□ -0.55
LINC01116-202ENST00000339037 IGHV3-35A0A0C4DH35 117 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 CGB1A6NKQ9 187 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 SULT1C2O00338 296 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 XRCC3O43542 346 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 SPRY2O43597 315 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 RPS19P39019 145 aaKnown RBP11.62□□□□□ -0.55
LINC01116-202ENST00000339037 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
LINC01116-202ENST00000339037 OR2B8PP59922 312 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 LSM3P62310 102 aaKnown RBP11.62□□□□□ -0.55
LINC01116-202ENST00000339037 PLET1Q6UQ28 207 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 ZNF818PQ6ZRF7 136 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 TMEM17Q86X19 198 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 OR5AP2Q8NGF4 316 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 ZNF502Q8TBZ5 544 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 YIPF6Q96EC8 236 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 SPAG8Q99932 426 aaPredicted RBP11.62□□□□□ -0.55
LINC01116-202ENST00000339037 C5orf66Q9H5L9 145 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 THYN1Q9P016 225 aa11.62□□□□□ -0.55
LINC01116-202ENST00000339037 IGLC7A0M8Q6 106 aa11.61□□□□□ -0.55
LINC01116-202ENST00000339037 UBE2NLQ5JXB2 153 aa11.61□□□□□ -0.55
LINC01116-202ENST00000339037 ZBTB34Q8NCN2 500 aa11.61□□□□□ -0.55
LINC01116-202ENST00000339037 KLK5Q9Y337 293 aaPredicted RBP11.61□□□□□ -0.55
LINC01116-202ENST00000339037 TRAV3A0A0B4J244 114 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 UBE2CO00762 179 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 RBFOX2O43251 390 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC01116-202ENST00000339037 TMEM127O75204 238 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 PTBP1P26599 531 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC01116-202ENST00000339037 CBX5P45973 191 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 CATR1Q13166 79 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 CROCCP3Q8IVE0 287 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 TMEM217Q8N7C4 229 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 STPG3Q8N7X2 389 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 SAMD12Q8N8I0 201 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 OR51H1Q8NH63 302 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 GIMAP1Q8WWP7 306 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 TMEM190Q8WZ59 177 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 S100A16Q96FQ6 103 aaKnown RBP11.6□□□□□ -0.55
LINC01116-202ENST00000339037 COMMD5Q9GZQ3 224 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 IFT46Q9NQC8 304 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 DAZ1Q9NQZ3 744 aaKnown RBP11.6□□□□□ -0.55
LINC01116-202ENST00000339037 EHFQ9NZC4 300 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 UBQLN2Q9UHD9 624 aa11.6□□□□□ -0.55
LINC01116-202ENST00000339037 PCLOQ9Y6V0 5065 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 KIR2DL5BA0A0G2JN68 375 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 KIR2DL5BA0A0G2JPC4 375 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 TSPAN4O14817 238 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 CYB5BO43169 146 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 TGOLN2O43493 480 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 HPRT1P00492 218 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 RFX2P48378 723 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 TAS2R31P59538 309 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 TAS2R20P59543 309 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 TMEM69Q5SWH9 247 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 KIR2DL5AQ8N109 375 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 TSPAN14Q8NG11 270 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 KIR2DL5BQ8NHK3 375 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 SRSF8Q9BRL6 282 aaKnown RBP11.59□□□□□ -0.55
LINC01116-202ENST00000339037 QTRT1Q9BXR0 403 aaKnown RBP11.59□□□□□ -0.55
LINC01116-202ENST00000339037 ZNF436Q9C0F3 470 aaPredicted RBP11.59□□□□□ -0.55
LINC01116-202ENST00000339037 ANAPC10Q9UM13 185 aa11.59□□□□□ -0.55
LINC01116-202ENST00000339037 VPS13DQ5THJ4 4388 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 A0A087WXM4 84 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 S1PR2O95136 353 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 NQO2P16083 231 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 GNRHRP30968 328 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 HERV-K104P61576 105 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 POU2AF1Q16633 256 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 ODF3L2Q3SX64 289 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 AADACL3Q5VUY0 350 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 LAMTOR1Q6IAA8 161 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 RPP25LQ8N5L8 163 aaKnown RBP11.58□□□□□ -0.56
LINC01116-202ENST00000339037 GDPD1Q8N9F7 314 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 VN1R17PQ8TDU5 208 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms