RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 WFDC1Q9HC57 220 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 NDUFA4L2Q9NRX3 87 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ITPR3Q14573 2671 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CREBBPQ92793 2442 aa11.77□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CGB1A6NKQ9 187 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 NCBP2LA6PVI3 153 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 GNB1P62873 340 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 CLINT1Q14677 625 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 TEX261Q6UWH6 196 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 OR10W1Q8NGF6 305 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 OR5C1Q8NGR4 320 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 U3KQ87 197 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 AKAP9Q99996 3911 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ZANQ9Y493 2812 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ZFHX3Q15911 3703 aa11.77□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ACTL6BO94805 426 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 LY86O95711 162 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 IFNA10P01566 189 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ARL16Q0P5N6 197 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 RPL7L1Q6DKI1 246 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 OR8G2PQ6IF36 304 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 HAPLN4Q86UW8 402 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ST8SIA2Q92186 375 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 A0A1B0GW64 132 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 C15orf62A8K5M9 175 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 CA2P00918 260 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 FBP1P09467 338 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 MAS1LP35410 378 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 UBA52P62987 128 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 C5orf64Q2M2E5 130 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 OR1S2Q8NGQ3 325 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 NANPQ8TBE9 248 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 SSX3Q99909 188 aa11.76□□□□□ -0.53
CDK5RAP3-201ENST00000338399 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-201ENST00000338399 COMPP49747 757 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-201ENST00000338399 BPIFB3P59826 476 aa11.75□□□□□ -0.53
CDK5RAP3-201ENST00000338399 RPP30P78346 268 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-201ENST00000338399 BCL6BQ8N143 479 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ZNF680Q8NEM1 530 aa11.75□□□□□ -0.53
CDK5RAP3-201ENST00000338399 PIFOQ8TCI5 191 aa11.75□□□□□ -0.53
CDK5RAP3-201ENST00000338399 C22orf15Q8WYQ4 148 aa11.75□□□□□ -0.53
CDK5RAP3-201ENST00000338399 A0A1W2PN81 502 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 PMS2P5A8MQ11 134 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 FSHBP01225 129 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 CHRNA7P36544 502 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 EXOSC2Q13868 293 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 SLC24A4Q8NFF2 622 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 TMEM170AQ8WVE7 144 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 C1RLQ9NZP8 487 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 MDFIC2A0A1B0GVS7 189 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 JTBO76095 146 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 CNIH1O95406 144 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 OR8U8P0C7N1 319 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 TPT1P13693 172 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 HBG1P69891 147 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 HBG2P69892 147 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 LRRC75BQ2VPJ9 315 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ALKAL2Q6UX46 152 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 Q8N9W7 124 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 STOML3Q8TAV4 291 aa11.74□□□□□ -0.53
CDK5RAP3-201ENST00000338399 BORCS7-ASMTA0A0B4J1R7 106 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 IFNA7P01567 189 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 NPY1RP25929 384 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ERHP84090 104 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 WT1-ASQ06250 92 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 SLC38A11Q08AI6 406 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ZNF767PQ75MW2 155 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 TMEM219Q86XT9 240 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 BAP18Q8IXM2 172 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 STPG2Q8N412 459 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 LILRB2Q8N423 598 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 OR10P1Q8NGE3 313 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 SRSF12Q8WXF0 261 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ATP5SQ99766 215 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
CDK5RAP3-201ENST00000338399 H3BUX3 64 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 APELAP0DMC3 54 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 OR13C7P0DN81 318 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 SNCAP37840 140 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 HTR2BP41595 481 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 RAB11AP62491 216 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ETV3LQ6ZN32 361 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 UBAC2Q8NBM4 344 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 INS-IGF2F8WCM5 200 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 IFNA4P05014 189 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 REG1AP05451 166 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 EIF5AP63241 154 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 ZNF266Q14584 549 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 FXYD3Q14802 87 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 LY6EQ16553 131 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 SLC25A33Q9BSK2 321 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 UBQLN2Q9UHD9 624 aa11.72□□□□□ -0.53
CDK5RAP3-201ENST00000338399 NAV3Q8IVL0 2385 aa11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 IGLC7A0M8Q6 106 aa11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 TEX22C9J3V5 150 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 197.3 ms