RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SSBP3Q9BWW4 388 aaPredicted RBP11.1□□□□□ -0.63
HLCS-201ENST00000336648 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.09□□□□□ -0.63
HLCS-201ENST00000336648 SLC25A45Q8N413 288 aa11.09□□□□□ -0.63
HLCS-201ENST00000336648 EDA2RQ9HAV5 297 aa11.09□□□□□ -0.63
HLCS-201ENST00000336648 SMCHD1A6NHR9 2005 aa11.09□□□□□ -0.63
HLCS-201ENST00000336648 PEX7O00628 323 aa11.09□□□□□ -0.63
HLCS-201ENST00000336648 ACP7Q6ZNF0 438 aa11.09□□□□□ -0.63
HLCS-201ENST00000336648 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
HLCS-201ENST00000336648 PF4P02776 101 aa11.08□□□□□ -0.63
HLCS-201ENST00000336648 TRGV3P03979 118 aa11.08□□□□□ -0.63
HLCS-201ENST00000336648 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.63
HLCS-201ENST00000336648 RPP21Q9H633 154 aaKnown RBP11.08□□□□□ -0.63
HLCS-201ENST00000336648 SPANXA1Q9NS26 97 aa11.08□□□□□ -0.63
HLCS-201ENST00000336648 FOXA3P55318 350 aaPredicted RBP11.08□□□□□ -0.64
HLCS-201ENST00000336648 HIST1H4AP62805 103 aaKnown RBP11.08□□□□□ -0.64
HLCS-201ENST00000336648 ICAM4Q14773 271 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 TOMM7Q9P0U1 55 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 KIF13AQ9H1H9 1805 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 LINC01549A6NIU2 74 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 PLSCR4Q9NRQ2 329 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 SCN1AP35498 2009 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 TAF1P21675 1872 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
HLCS-201ENST00000336648 TMEM155Q4W5P6 130 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 RPRMQ9NS64 109 aa11.08□□□□□ -0.64
HLCS-201ENST00000336648 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 TRAV24A0A0B4J272 114 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 TDGF1P13385 188 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 CCL19Q99731 98 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 SEMA5BQ9P283 1151 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 ZNF883P0CG24 379 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 EFNB1P98172 346 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 C21orf62Q9NYP8 219 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 MRPS18CQ9Y3D5 142 aaKnown RBP11.07□□□□□ -0.64
HLCS-201ENST00000336648 NR2C2APQ86WQ0 139 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 MS4A6AQ9H2W1 248 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 CHODLQ9H9P2 273 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 IZUMO1RA6ND01 250 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 WDR82Q6UXN9 313 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 OR11H4Q8NGC9 324 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 SDF2L1Q9HCN8 221 aa11.07□□□□□ -0.64
HLCS-201ENST00000336648 TRPM6Q9BX84 2022 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 CDK2AP2O75956 126 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 REG1AP05451 166 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 RNF182Q8N6D2 247 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 TUBA4BQ9H853 241 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 KLF4O43474 513 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 LY6EQ16553 131 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 SPSB2Q99619 263 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 LOC105371267A0A1B0GV96 52 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 SAMD5Q5TGI4 173 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 OR52E5Q8NH55 327 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 SLC50A1Q9BRV3 221 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 OTORQ9NRC9 128 aa11.06□□□□□ -0.64
HLCS-201ENST00000336648 KBTBD11-OT1A0A1B0GTJ5 212 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 C12orf77C9JDV5 145 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 LEPP41159 167 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 SEC11AP67812 179 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 CD69Q07108 199 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 CDCP2Q5VXM1 449 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 ASCL2Q99929 193 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 MRPL20Q9BYC9 149 aaKnown RBP11.05□□□□□ -0.64
HLCS-201ENST00000336648 FBXL7Q9UJT9 491 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 A0A1W2PRS3 328 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 C9JCJ5 164 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 TNFRSF6BO95407 300 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 MOSP00540 346 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 SRP19P09132 144 aaKnown RBP11.05□□□□□ -0.64
HLCS-201ENST00000336648 PRSS53Q2L4Q9 553 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 PEMTQ9UBM1 199 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 ZNF48Q96MX3 618 aaPredicted RBP11.05□□□□□ -0.64
HLCS-201ENST00000336648 MYOD1P15172 320 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 PPP1R27Q86WC6 154 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 LINC00312Q9Y6C7 94 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 GREM1O60565 184 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 C1QTNF5Q9BXJ0 243 aa11.05□□□□□ -0.64
HLCS-201ENST00000336648 STRCQ7RTU9 1775 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 ATXN7O15265 892 aaPredicted RBP11.04□□□□□ -0.64
HLCS-201ENST00000336648 SAA1P0DJI8 122 aaPredicted RBP11.04□□□□□ -0.64
HLCS-201ENST00000336648 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 BRWD1Q9NSI6 2320 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 TRAV9-2A0A087WT02 112 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 MALP21145 153 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 IFITM2Q01629 132 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 FER1L6-AS1Q8NA97 138 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 ARPC1AQ92747 370 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 HSD52Q0P140 79 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 PVRIGQ6DKI7 326 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 ZNF703Q9H7S9 590 aaPredicted RBP11.04□□□□□ -0.64
HLCS-201ENST00000336648 PLNP26678 52 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 EGR4Q05215 589 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 PPP1R32Q7Z5V6 425 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 OR10W1Q8NGF6 305 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 DPM2O94777 84 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms