RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 PEAR1Q5VY43 1037 aaPredicted RBP13.2□□□□□ -0.3
HDAC5-202ENST00000336057 MOSP00540 346 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 FAM106CPP0CH98 169 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 VOPP1Q96AW1 172 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 ANAPC1Q9H1A4 1944 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 TRAV30A0A087WSZ9 112 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 YPEL1O60688 119 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 SRSF12Q8WXF0 261 aaKnown RBP13.2□□□□□ -0.3
HDAC5-202ENST00000336057 YPEL2Q96QA6 119 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 PLXNA4Q9HCM2 1894 aa13.2□□□□□ -0.3
HDAC5-202ENST00000336057 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.19□□□□□ -0.3
HDAC5-202ENST00000336057 HINT1P49773 126 aaPredicted RBP13.19□□□□□ -0.3
HDAC5-202ENST00000336057 MBD3L1Q8WWY6 194 aa13.19□□□□□ -0.3
HDAC5-202ENST00000336057 OTX1P32242 354 aaPredicted RBP13.19□□□□□ -0.3
HDAC5-202ENST00000336057 ARF6P62330 175 aa13.19□□□□□ -0.3
HDAC5-202ENST00000336057 TMEM42Q69YG0 159 aa13.19□□□□□ -0.3
HDAC5-202ENST00000336057 NAPSAO96009 420 aa13.19□□□□□ -0.3
HDAC5-202ENST00000336057 FOLR2P14207 255 aa13.19□□□□□ -0.3
HDAC5-202ENST00000336057 DNM1P46Q6ZS02 220 aa13.19□□□□□ -0.3
HDAC5-202ENST00000336057 TMEM106BQ9NUM4 274 aa13.19□□□□□ -0.3
HDAC5-202ENST00000336057 CKS2P33552 79 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 HEATR5AQ86XA9 2040 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 TCF21O43680 179 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 HEPN1Q6WQI6 88 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 UBE2CO00762 179 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 B9A039 149 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 GFRA1P56159 465 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 MORN2Q502X0 79 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 SCGB1D4Q6XE38 83 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 GOLT1AQ6ZVE7 132 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 IMMP2LQ96T52 175 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 THADAQ6YHU6 1953 aa13.18□□□□□ -0.3
HDAC5-202ENST00000336057 MGPP08493 103 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 MIR17HGQ75NE6 70 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 CACNG8Q8WXS5 425 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 AUP1Q9Y679 476 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 LINC00587B1AMM8 73 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 LIPFP07098 398 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 NMSQ5H8A3 153 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
HDAC5-202ENST00000336057 PNKDQ8N490 385 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 NBEAP1P0C6P0 100 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 MEF2CQ06413 473 aaPredicted RBP13.17□□□□□ -0.3
HDAC5-202ENST00000336057 VSIRQ9H7M9 311 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 C1QTNF9BB2RNN3 333 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 RBFOX2O43251 390 aaKnown RBP eCLIP13.17□□□□□ -0.34e-6■□□□□ 9
HDAC5-202ENST00000336057 SOD3P08294 240 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 RPL7P18124 248 aaKnown RBP13.17□□□□□ -0.3
HDAC5-202ENST00000336057 CSRP2Q16527 193 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 TMEM144Q7Z5S9 345 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 TMEM171Q8WVE6 324 aa13.17□□□□□ -0.3
HDAC5-202ENST00000336057 TRAV9-1A0A075B6T8 112 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 SAA2-SAA4A0A096LPE2 208 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 SAA2P0DJI9 122 aaPredicted RBP13.16□□□□□ -0.3
HDAC5-202ENST00000336057 NMUP48645 174 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 SPRR3Q9UBC9 169 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 RABAC1Q9UI14 185 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 A0A1B0GV90 55 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 TFF1P04155 84 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 LYL1P12980 280 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 HBBP68871 147 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 RPL24P83731 157 aaKnown RBP13.16□□□□□ -0.3
HDAC5-202ENST00000336057 PSG9Q00887 426 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 ZCCHC14Q8WYQ9 949 aaKnown RBP13.16□□□□□ -0.3
HDAC5-202ENST00000336057 EAF1Q96JC9 268 aaPredicted RBP13.16□□□□□ -0.3
HDAC5-202ENST00000336057 NEU1Q99519 415 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 LINC00312Q9Y6C7 94 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 PLXNA2O75051 1894 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 A0A1B0GW64 132 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 HERVK_113P61574 105 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 LYRM7Q5U5X0 104 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 MUC15Q8N387 334 aa13.16□□□□□ -0.3
HDAC5-202ENST00000336057 MRPL20Q9BYC9 149 aaKnown RBP13.16□□□□□ -0.3
HDAC5-202ENST00000336057 C15orf61A6NNL5 157 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 GATA2P23769 480 aaPredicted RBP13.15□□□□□ -0.3
HDAC5-202ENST00000336057 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
HDAC5-202ENST00000336057 C12orf54Q6X4T0 127 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 FOXL2NBQ6ZUU3 175 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 TMEM170AQ8WVE7 144 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 METTL26Q96S19 204 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 TRAV1-1A0A0B4J248 108 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 PEX7O00628 323 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 CEACAM1P13688 526 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms