RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 OR1A2Q9Y585 309 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 MPC1Q9Y5U8 109 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 A0A1W2PPI3 338 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 MANSC4A6NHS7 340 aaPredicted RBP7.17□□□□□ -1.26
TDP1-201ENST00000335725 TNFSF14O43557 240 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 OR2J3O76001 311 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 GCSHP23434 173 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 KIR2DS2P43631 304 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 RBM11P57052 281 aaKnown RBP7.17□□□□□ -1.26
TDP1-201ENST00000335725 RPL27P61353 136 aaKnown RBP7.17□□□□□ -1.26
TDP1-201ENST00000335725 LHX8Q68G74 356 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 VN1R2Q8NFZ6 395 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 OR1L8Q8NGR8 309 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 MDFICQ9P1T7 246 aa7.17□□□□□ -1.26
TDP1-201ENST00000335725 COL16A1Q07092 1604 aaPredicted RBP7.17□□□□□ -1.26
TDP1-201ENST00000335725 ASAH2BP0C7U1 165 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 SEC61GP60059 68 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 SLC38A11Q08AI6 406 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 EFNB3Q15768 340 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 OR13A1Q8NGR1 328 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 C1QTNF5Q9BXJ0 243 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 DOCK11Q5JSL3 2073 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 TRBV20OR9-2A0A075B6H5 130 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 MT-CO3P00414 261 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 LINC00694P0DN24 101 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 ORM2P19652 201 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 ZNF77Q15935 545 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 FAM120AOSQ5T036 256 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 C1QL2Q7Z5L3 287 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 OR2A1Q8NGT9 310 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 PRR7Q8TB68 274 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 C8orf44Q96CB5 159 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 C1orf147Q96MC9 270 aaPredicted RBP7.16□□□□□ -1.26
TDP1-201ENST00000335725 TRIB1Q96RU8 372 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 NUDT22Q9BRQ3 303 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 TECRQ9NZ01 308 aaKnown RBP7.16□□□□□ -1.26
TDP1-201ENST00000335725 NUP210Q8TEM1 1887 aaPredicted RBP7.16□□□□□ -1.26
TDP1-201ENST00000335725 IGKV1D-8A0A087WSZ0 117 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 CCL15-CCL14A0A0B4J2E2 113 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 IGHV1-24A0A0C4DH33 117 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 FEZF1A0PJY2 475 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 IGLL5B9A064 214 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 SYNGR2O43760 224 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 LMX1BO60663 402 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 SRSF10O75494 262 aaKnown RBP7.16□□□□□ -1.26
TDP1-201ENST00000335725 HES1Q14469 280 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 PPP1R27Q86WC6 154 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 OR51H1Q8NH63 302 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 R3HDMLQ9H3Y0 253 aa7.16□□□□□ -1.26
TDP1-201ENST00000335725 ACP1P24666 158 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 C3AR1Q16581 482 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 CR1LQ2VPA4 569 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 RDH5Q92781 318 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 PRADC1Q9BSG0 188 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 ANAPC1Q9H1A4 1944 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 SMIM27A0A1W2PRY6 76 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 ZNF823P16415 610 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 RNPS1Q15287 305 aaKnown RBP7.15□□□□□ -1.26
TDP1-201ENST00000335725 SP8Q8IXZ3 490 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 LRRC25Q8N386 305 aaPredicted RBP7.15□□□□□ -1.26
TDP1-201ENST00000335725 OR9G1Q8NH87 305 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 HSD17B10Q99714 261 aaKnown RBP7.15□□□□□ -1.26
TDP1-201ENST00000335725 TMEM147Q9BVK8 224 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 HIGD1BQ9P298 99 aa7.15□□□□□ -1.26
TDP1-201ENST00000335725 OTOL1A6NHN0 477 aaPredicted RBP7.15□□□□□ -1.27
TDP1-201ENST00000335725 CSN1S1P47710 185 aa7.15□□□□□ -1.27
TDP1-201ENST00000335725 SPINT3P49223 89 aa7.15□□□□□ -1.27
TDP1-201ENST00000335725 BCL6BQ8N143 479 aaPredicted RBP7.15□□□□□ -1.27
TDP1-201ENST00000335725 DUX3Q96PT4 197 aa7.15□□□□□ -1.27
TDP1-201ENST00000335725 RASL11BQ9BPW5 248 aa7.15□□□□□ -1.27
TDP1-201ENST00000335725 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.27
TDP1-201ENST00000335725 TMEM160Q9NX00 188 aa7.15□□□□□ -1.27
TDP1-201ENST00000335725 KLF12Q9Y4X4 402 aa7.15□□□□□ -1.27
TDP1-201ENST00000335725 MYO16Q9Y6X6 1858 aa7.15□□□□□ -1.27
TDP1-201ENST00000335725 GGTLC3B5MD39 225 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 K7EN84 100 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 MYOD1P15172 320 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 DAP3P51398 398 aaKnown RBP7.14□□□□□ -1.27
TDP1-201ENST00000335725 RPL31P62899 125 aaKnown RBP7.14□□□□□ -1.27
TDP1-201ENST00000335725 DLX2Q07687 328 aaPredicted RBP7.14□□□□□ -1.27
TDP1-201ENST00000335725 TRIP6Q15654 476 aaKnown RBP7.14□□□□□ -1.27
TDP1-201ENST00000335725 ZIC1Q15915 447 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 TBC1D26Q86UD7 250 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 FGF14Q92915 247 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 TRAV24A0A0B4J272 114 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 NPFFO15130 113 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 NXPH3O95157 252 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 MEOX1P50221 254 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 OR2H1Q9GZK4 316 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 THSD7AQ9UPZ6 1657 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 SCO2A0A1W2PP80 73 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 TMEM202A6NGA9 273 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 RPS18P62269 152 aaKnown RBP7.14□□□□□ -1.27
TDP1-201ENST00000335725 LIME1Q9H400 295 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 LHFPL6Q9Y693 200 aa7.14□□□□□ -1.27
TDP1-201ENST00000335725 NCKAP5O14513 1909 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 EML2O95834 649 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 TEN1Q86WV5 123 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 TMEM219Q86XT9 240 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms