RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 IGKV3-15P01624 115 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 NTF3P20783 257 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 RPL19P84098 196 aaKnown RBP11.53□□□□□ -0.56
SF1-202ENST00000334944 FAM201AQ5SY85 155 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 FGFRL1Q8N441 504 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 OR4B1Q8NGF8 309 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 KCNIP1Q9NZI2 227 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 IGHV1-18A0A0C4DH31 117 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 CLEC18AA5D8T8 446 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 OCIAD2Q56VL3 154 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 Q8IYB0 196 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 CLEC18CQ8NCF0 446 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 OR13A1Q8NGR1 328 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 GALMQ96C23 342 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 CSTL1Q9H114 145 aa11.53□□□□□ -0.56
SF1-202ENST00000334944 IGHV2-70DA0A0C4DH43 119 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 C11orf94C9JXX5 98 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 FCN1O00602 326 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 PAFAH1B2P68402 229 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 RELBQ01201 579 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 TMEM144Q7Z5S9 345 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 SARAFQ96BY9 339 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 RCHY1Q96PM5 261 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 NRN1Q9NPD7 142 aa11.52□□□□□ -0.56
SF1-202ENST00000334944 TPRP12270 2363 aaKnown RBP11.52□□□□□ -0.57
SF1-202ENST00000334944 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.57
SF1-202ENST00000334944 TOMM40O96008 361 aa11.52□□□□□ -0.57
SF1-202ENST00000334944 TSPOP30536 169 aa11.52□□□□□ -0.57
SF1-202ENST00000334944 LCN2P80188 198 aa11.52□□□□□ -0.57
SF1-202ENST00000334944 GUSBP1Q15486 140 aa11.52□□□□□ -0.57
SF1-202ENST00000334944 KRTCAP3Q53RY4 240 aa11.52□□□□□ -0.57
SF1-202ENST00000334944 LRRC29Q8WV35 223 aa11.52□□□□□ -0.57
SF1-202ENST00000334944 NEIL1Q96FI4 390 aaPredicted RBP11.52□□□□□ -0.57
SF1-202ENST00000334944 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.57
SF1-202ENST00000334944 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 C17orf98A8MV24 154 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 PRR33A8MZF0 331 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 ZNF90Q03938 601 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 PRR31Q5SQ13 230 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 ACP7Q6ZNF0 438 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 RNF2Q99496 336 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 ZNF586Q9NXT0 402 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 BET1LQ9NYM9 111 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 BSNQ9UPA5 3926 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 TMEM250H0YL14 139 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 M0R1B8 84 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 S1PR2O95136 353 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 CLDN1O95832 211 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 GNB1P62873 340 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 LRRC75BQ2VPJ9 315 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 UTF1Q5T230 341 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 TAF15Q92804 592 aaKnown RBP eCLIP11.51□□□□□ -0.571e-8■■□□□ 12.7
SF1-202ENST00000334944 LRFN3Q9BTN0 628 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 WDR61Q9GZS3 305 aaKnown RBP11.51□□□□□ -0.57
SF1-202ENST00000334944 GNB4Q9HAV0 340 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 PSG11Q9UQ72 335 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 CD177Q8N6Q3 437 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 OR10G9Q8NGN4 311 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 OR10G7Q8NGN6 311 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 LIN7CQ9NUP9 197 aaKnown RBP11.51□□□□□ -0.57
SF1-202ENST00000334944 PROCRQ9UNN8 238 aa11.51□□□□□ -0.57
SF1-202ENST00000334944 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.5□□□□□ -0.57
SF1-202ENST00000334944 PPBPP02775 128 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 COX5AP20674 150 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 TNFSF4P23510 183 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 MOB1BQ7L9L4 216 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 NINJ1Q92982 152 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 LEAP2Q969E1 77 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 CXXC4Q9H2H0 198 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 ZNF71Q9NQZ8 489 aaPredicted RBP11.5□□□□□ -0.57
SF1-202ENST00000334944 TRBV20OR9-2A0A075B6H5 130 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 A0A1W2PN81 502 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 SNURFLB1AK76 121 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 SAP30O75446 220 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 KITLGP21583 273 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 BRWD1-AS2P59051 145 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 HLA-DRB5Q30154 266 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 ZNF718Q3SXZ3 478 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 ZNRF1Q8ND25 227 aa11.5□□□□□ -0.57
SF1-202ENST00000334944 OR2T8A6NH00 312 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 TM4SF5O14894 197 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 SPRY3O43610 288 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 GPX1P07203 203 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 C3orf79P0CE67 100 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 OR4A47Q6IF82 309 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 C22orf34Q6ZV56 151 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 BHLHA15Q7RTS1 189 aaPredicted RBP11.49□□□□□ -0.57
SF1-202ENST00000334944 UHRF2Q96PU4 802 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 TLN1Q9Y490 2541 aaKnown RBP11.49□□□□□ -0.57
SF1-202ENST00000334944 LINC00473A8K010 186 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 SLC38A11Q08AI6 406 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 SFRP2Q96HF1 295 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 RAB40CQ96S21 281 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 HES4Q9HCC6 221 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 ARFGEF3Q5TH69 2177 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 MDFIC2A0A1B0GVS7 189 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms