RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 OTX1P32242 354 aaPredicted RBP4.7□□□□□ -1.66
PTPRB-202ENST00000334414 CBLN3Q6UW01 205 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 C9orf40Q8IXQ3 194 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 OR9G1Q8NH87 305 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 MAGEA5P43359 124 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 RPRMLQ8N4K4 120 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 TEX45Q8NA69 505 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 IGHV4-39P01824 125 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 UBE2WQ96B02 151 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 ZFP36L2P47974 494 aaKnown RBP4.69□□□□□ -1.66
PTPRB-202ENST00000334414 TPTE2P1Q5T6R2 138 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 LINC01545Q5VT33 79 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 WDR82Q6UXN9 313 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 GGTLC1Q9BX51 225 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 TRGV11A0A075B6L2 103 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 SCO2A0A1W2PP80 73 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM258P61165 79 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 DTX2Q86UW9 622 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 FGF11Q92914 225 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 ABHD17AQ96GS6 310 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 IFI27L2Q9H2X8 130 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 FNDC10F2Z333 226 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 SIVA1O15304 175 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 ZNF415Q09FC8 603 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 NXPH1P58417 271 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 ALKBH6Q3KRA9 238 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 CITED2Q99967 270 aaPredicted RBP4.69□□□□□ -1.66
PTPRB-202ENST00000334414 RTBDNQ9BSG5 229 aaPredicted RBP4.69□□□□□ -1.66
PTPRB-202ENST00000334414 SEMA5BQ9P283 1151 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 A8MWP6 167 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 GLRX5Q86SX6 157 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 DLL3Q9NYJ7 618 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 TRAV24A0A0B4J272 114 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 A0A1B0GWJ7 208 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 C15orf61A6NNL5 157 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 IGHV2-70P01814 119 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 COL9A1P20849 921 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 ZNF525Q8N782 197 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 Q9H3A6 140 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 LEPROTO15243 131 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 NTN1O95631 604 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 NBEAP1P0C6P0 100 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 LINC00271P0C7V0 271 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 BTCP35070 178 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM196Q5HYL7 178 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 RFLNBQ8N5W9 214 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 A0A1W2PPV9 198 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 MDKP21741 143 aaPredicted RBP4.69□□□□□ -1.66
PTPRB-202ENST00000334414 ID4P47928 161 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 TAL2Q16559 108 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 PPDPFLQ8WWR9 84 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 NINQ8N4C6 2090 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 TRACP01848 142 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 CSRP3P50461 194 aa4.69□□□□□ -1.66
PTPRB-202ENST00000334414 ZXDCQ2QGD7 858 aaPredicted RBP4.69□□□□□ -1.66
PTPRB-202ENST00000334414 PGFP49763 221 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 UNC119Q13432 240 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 SPATA31B1PQ5VZV4 182 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 TRGV8A0A0C4DH27 118 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 FAM231BA6NCW3 169 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 ZNF205O95201 554 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 LYL1P12980 280 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 MYOD1P15172 320 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 IGFBP3P17936 291 aaPredicted RBP4.68□□□□□ -1.66
PTPRB-202ENST00000334414 LYPD1Q8N2G4 141 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 IFI27L1Q96BM0 104 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 SIRT4Q9Y6E7 314 aaPredicted RBP4.68□□□□□ -1.66
PTPRB-202ENST00000334414 Q0VG73 95 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 MS4A4AQ96JQ5 239 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 CITED1Q99966 193 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 TRAV8-1A0A0A6YYK1 113 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 CGAP01215 116 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 CT62P0C5K7 136 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 IGLV3-21P80748 117 aaPredicted RBP4.68□□□□□ -1.66
PTPRB-202ENST00000334414 RLN3Q8WXF3 142 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM126AQ9H061 195 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 TCRBV4S1A1TA0A5B7 111 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 KLF4O43474 513 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM144Q7Z5S9 345 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM229AB2RXF0 380 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 REG1AP05451 166 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 MRPL20Q9BYC9 149 aaKnown RBP4.68□□□□□ -1.66
PTPRB-202ENST00000334414 IGHV5-51A0A0C4DH38 117 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 IGHV3-64DA0A0J9YX35 117 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 MESP2Q0VG99 397 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 CST9LQ9H4G1 147 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 LHFPL6Q9Y693 200 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 SIPA1L1O43166 1804 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 PLAUP00749 431 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 IGHG4P01861 327 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 SCTP09683 121 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 CCL2P13500 99 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 ZPLD1Q8TCW7 415 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 COQ2Q96H96 371 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 CISD3P0C7P0 127 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 CDKN1BP46527 198 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 PDE6HQ13956 83 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 KIR3DS1Q14943 382 aa4.68□□□□□ -1.66
PTPRB-202ENST00000334414 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.68□□□□□ -1.66
PTPRB-202ENST00000334414 H3BQ85 93 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms