RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 ACSM6Q6P461 480 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 PDPNQ86YL7 162 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 ABHD12Q8N2K0 398 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 SLC24A4Q8NFF2 622 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 NEU4Q8WWR8 484 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 HARBI1Q96MB7 349 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 NABP2Q9BQ15 211 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 HINT2Q9BX68 163 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 NPCDR1Q9BY65 106 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 TMEM133Q9H2Q1 129 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 UNKLQ9H9P5 680 aaKnown RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 SLC39A9Q9NUM3 307 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 BET1LQ9NYM9 111 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 GNG13Q9P2W3 67 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 WDR83OSQ9Y284 106 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 MED13LQ71F56 2210 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 LOC102723971A0A1B0GUV8 181 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 MAP1LC3B2A6NCE7 125 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 TMEM8BA6NDV4 472 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 MPDU1O75352 247 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 SRP19P09132 144 aaKnown RBP7.07□□□□□ -1.28
LSAMP-201ENST00000333617 SAA1P0DJI8 122 aaPredicted RBP7.07□□□□□ -1.28
LSAMP-201ENST00000333617 ATF4P18848 351 aaPredicted RBP7.07□□□□□ -1.28
LSAMP-201ENST00000333617 RAB13P51153 203 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 DLK1P80370 383 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 PRCDQ00LT1 54 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 ZNF841Q6ZN19 808 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 SSX7Q7RTT5 188 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 TGIF2LXQ8IUE1 241 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 CBLN2Q8IUK8 224 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 RPP25LQ8N5L8 163 aaKnown RBP7.07□□□□□ -1.28
LSAMP-201ENST00000333617 C11orf42Q8N5U0 333 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 OR8B3Q8NGG8 313 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 OR10G4Q8NGN3 311 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 OR10G9Q8NGN4 311 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 OR10G7Q8NGN6 311 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 OR4C13Q8NGP0 309 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 RXFP4Q8TDU9 374 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 TMEM170AQ8WVE7 144 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 C17orf50Q8WW18 174 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 RAB1CQ92928 201 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 TNFRSF14Q92956 283 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 LHX4Q969G2 390 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 ST6GALNAC6Q969X2 333 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 FLYWCH2Q96CP2 140 aaKnown RBP7.07□□□□□ -1.28
LSAMP-201ENST00000333617 NEIL1Q96FI4 390 aaPredicted RBP7.07□□□□□ -1.28
LSAMP-201ENST00000333617 OR8B2Q96RD0 313 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 MAP1LC3BQ9GZQ8 125 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 PLEKHA3Q9HB20 300 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 MIOXQ9UGB7 285 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 MYO18BQ8IUG5 2567 aa7.07□□□□□ -1.28
LSAMP-201ENST00000333617 EPG5Q9HCE0 2579 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 PPIAL4CA0A0B4J2A2 164 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 CTXND1A0A1B0GTU2 59 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 TEX50A0A1B0GTY4 177 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 ZFP92A6NM28 416 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 PRSS46E5RG02 174 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 M0R036 132 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 SOX15O60248 233 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 IFNA1P01562 189 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 IGKV1D-33P01593 117 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 IGKV1-33P01594 117 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 SOD3P08294 240 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 PPIAL4GP0DN37 164 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 BCL2P10415 239 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 MYOD1P15172 320 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 PRRX1P54821 245 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 DIAPH2-AS1Q14236 149 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 ACOT6Q3I5F7 207 aaPredicted RBP7.06□□□□□ -1.28
LSAMP-201ENST00000333617 AKIRIN2Q53H80 203 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 OR5B3Q8NH48 314 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 OR4A5Q8NH83 315 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 TIMD4Q96H15 378 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 PCGF1Q9BSM1 259 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 ACTR3CQ9C0K3 210 aaPredicted RBP7.06□□□□□ -1.28
LSAMP-201ENST00000333617 WASHC3Q9Y3C0 194 aa7.06□□□□□ -1.28
LSAMP-201ENST00000333617 CACNA1BQ00975 2339 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 IGHV2-26A0A0B4J1V2 119 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 hCG_1809904A0A1W2PP81 198 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 A0A1W2PPE2 198 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 A0A1W2PR64 198 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 A0A1W2PRV1 198 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 LY6HO94772 140 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 CA2P00918 260 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 RBP4P02753 201 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 OPN1MWP04001 364 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 SNRNP70P08621 437 aaKnown RBP7.05□□□□□ -1.28
LSAMP-201ENST00000333617 OPN1MW2P0DN77 364 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 OPN1MW3P0DN78 364 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 AGAP20933 346 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 USF1P22415 310 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-201ENST00000333617 GNLYP22749 145 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 MC5RP33032 325 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 OPRK1P41145 380 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 UQCRFS1P47985 274 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 CEBPGP53567 150 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 ATP5IP56385 69 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-201ENST00000333617 AWAT1Q58HT5 328 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 WDR25Q64LD2 544 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-201ENST00000333617 FAM122CQ6P4D5 195 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms