RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 FOXC2Q99958 501 aa18.69■□□□□ 0.58
TSEN54-201ENST00000333213 QTRT1Q9BXR0 403 aaKnown RBP18.69■□□□□ 0.58
TSEN54-201ENST00000333213 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.69■□□□□ 0.58
TSEN54-201ENST00000333213 TBL2Q9Y4P3 447 aaKnown RBP18.69■□□□□ 0.58
TSEN54-201ENST00000333213 NPFFO15130 113 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 SSSCA1O60232 199 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 SMIM3Q9BZL3 60 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 FAM90A9PA6NNJ1 464 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 CHST1O43916 411 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 GATA3P23771 443 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 CD24P25063 80 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 CNTFRP26992 372 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 AKR1D1P51857 326 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 RPS16P62249 146 aaKnown RBP18.68■□□□□ 0.58
TSEN54-201ENST00000333213 GUK1Q16774 197 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 AARDQ4LEZ3 155 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 PBDC1Q9BVG4 233 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 HSPB7Q9UBY9 170 aa18.68■□□□□ 0.58
TSEN54-201ENST00000333213 RPL35P42766 123 aaKnown RBP18.67■□□□□ 0.58
TSEN54-201ENST00000333213 PAX9P55771 341 aa18.67■□□□□ 0.58
TSEN54-201ENST00000333213 TNFRSF9Q07011 255 aa18.67■□□□□ 0.58
TSEN54-201ENST00000333213 KLF17Q5JT82 389 aaPredicted RBP18.67■□□□□ 0.58
TSEN54-201ENST00000333213 BRD3OSQ6XYD6 125 aa18.67■□□□□ 0.58
TSEN54-201ENST00000333213 WFDC1Q9HC57 220 aa18.67■□□□□ 0.58
TSEN54-201ENST00000333213 TEX15Q9BXT5 2789 aa18.67■□□□□ 0.58
TSEN54-201ENST00000333213 CREBBPQ92793 2442 aa18.67■□□□□ 0.58
TSEN54-201ENST00000333213 IGHV1-69DA0A0B4J2H0 117 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 AGPAT2O15120 278 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 VENTXO95231 258 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 IGHV1-69P01742 117 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 MT-ND4LP03901 98 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 MYOD1P15172 320 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 CAMLGP49069 296 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 SFT2D1Q8WV19 159 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 MALSU1Q96EH3 234 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 C12orf57Q99622 126 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 BET1LQ9NYM9 111 aa18.66■□□□□ 0.58
TSEN54-201ENST00000333213 TET2Q6N021 2002 aaPredicted RBP18.65■□□□□ 0.58
TSEN54-201ENST00000333213 OOSP1A8MZH6 123 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 FAM90A26D6RGX4 464 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 SYNGR2O43760 224 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 RBMXL2O75526 392 aaKnown RBP18.65■□□□□ 0.58
TSEN54-201ENST00000333213 CD1BP29016 333 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 RHEBQ15382 184 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 MRGPRG-AS1Q2M3A8 158 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 OR4A16Q8NH70 328 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 ZDHHC16Q969W1 377 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 TPSG1Q9NRR2 321 aa18.65■□□□□ 0.58
TSEN54-201ENST00000333213 SOX21Q9Y651 276 aaPredicted RBP18.65■□□□□ 0.58
TSEN54-201ENST00000333213 C15orf61A6NNL5 157 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 C1orf196B1AJZ1 125 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 UPK2O00526 184 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 MEOX2P50222 304 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 PPT1P50897 306 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 UBE2KP61086 200 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 ZNF266Q14584 549 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 SPINK9Q5DT21 86 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 RBKSQ9H477 322 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 TNCP24821 2201 aa18.64■□□□□ 0.58
TSEN54-201ENST00000333213 WRBO00258 174 aa18.64■□□□□ 0.57
TSEN54-201ENST00000333213 KBTBD11O94819 623 aa18.64■□□□□ 0.57
TSEN54-201ENST00000333213 IGKV1D-33P01593 117 aa18.64■□□□□ 0.57
TSEN54-201ENST00000333213 IGKV1-33P01594 117 aa18.64■□□□□ 0.57
TSEN54-201ENST00000333213 CCDC144NLQ6NUI1 221 aa18.64■□□□□ 0.57
TSEN54-201ENST00000333213 ZNF429Q86V71 674 aa18.64■□□□□ 0.57
TSEN54-201ENST00000333213 HIST1H2BAQ96A08 127 aa18.64■□□□□ 0.57
TSEN54-201ENST00000333213 BSCL2Q96G97 398 aaPredicted RBP18.64■□□□□ 0.57
TSEN54-201ENST00000333213 TMEM14BQ9NUH8 114 aa18.64■□□□□ 0.57
TSEN54-201ENST00000333213 UMAD1C9J7I0 102 aa18.63■□□□□ 0.57
TSEN54-201ENST00000333213 SLC25A17O43808 307 aa18.63■□□□□ 0.57
TSEN54-201ENST00000333213 IAPPP10997 89 aa18.63■□□□□ 0.57
TSEN54-201ENST00000333213 LGALS7P47929 136 aa18.63■□□□□ 0.57
TSEN54-201ENST00000333213 ZNF616Q08AN1 781 aa18.63■□□□□ 0.57
TSEN54-201ENST00000333213 CLEC9AQ6UXN8 241 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 RPS10P5Q9NQ39 176 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 FOXA2Q9Y261 457 aaPredicted RBP18.62■□□□□ 0.57
TSEN54-201ENST00000333213 ABCA1O95477 2261 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 C7orf77A4D0Y5 90 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 BTBD17A6NE02 478 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 FAM24AA6NFZ4 105 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 S100A8P05109 93 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 CRYGBP07316 175 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 SNRNP70P08621 437 aaKnown RBP18.62■□□□□ 0.57
TSEN54-201ENST00000333213 EWSR1Q01844 656 aaKnown RBP eCLIP18.62■□□□□ 0.57
TSEN54-201ENST00000333213 HNF4GQ14541 408 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 AWAT1Q58HT5 328 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 OR2C3Q8N628 320 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 EAF1Q96JC9 268 aaPredicted RBP18.62■□□□□ 0.57
TSEN54-201ENST00000333213 CLCC1Q96S66 551 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 SLC25A31Q9H0C2 315 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 SLC35B3Q9H1N7 401 aa18.62■□□□□ 0.57
TSEN54-201ENST00000333213 H3BP45 60 aa18.61■□□□□ 0.57
TSEN54-201ENST00000333213 PDLIM3Q53GG5 364 aaPredicted RBP18.61■□□□□ 0.57
TSEN54-201ENST00000333213 TMEM167AQ8TBQ9 72 aa18.61■□□□□ 0.57
TSEN54-201ENST00000333213 FLNAP21333 2647 aaKnown RBP18.61■□□□□ 0.57
TSEN54-201ENST00000333213 A0A0U1RQK1 487 aa18.61■□□□□ 0.57
TSEN54-201ENST00000333213 MAS1LP35410 378 aa18.61■□□□□ 0.57
TSEN54-201ENST00000333213 B2MP61769 119 aa18.61■□□□□ 0.57
TSEN54-201ENST00000333213 PSG5Q15238 335 aa18.61■□□□□ 0.57
TSEN54-201ENST00000333213 FAM120AOSQ5T036 256 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms